Ochrobactrum sp. EEELCW01: GTN27_13265
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Entry
GTN27_13265 CDS
T07148
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocl03032
]
GTN27_13265
03400 DNA repair and recombination proteins [BR:
ocl03400
]
GTN27_13265
Enzymes [BR:
ocl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GTN27_13265
DNA replication proteins [BR:
ocl03032
]
Prokaryotic type
DNA Topoisomerases
GTN27_13265
DNA repair and recombination proteins [BR:
ocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTN27_13265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QTN05833
LinkDB
All DBs
Position
2:135218..136279
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AA seq
353 aa
AA seq
DB search
MLKKSSAVPLLQNNAAHGLVHVSDTAPGIRRLRCGAGFRYVRFDKKAISVADRNRIAKLA
IPPAWNDVWICCDQRGHIQATGRDTRGRKQYRYHSAWMAMQEETKFSSLPDFAGALSRLR
KVVDIDMRRRSLCREKVVATVIWLMDRLLLRVGNPDYARDNKSFGVTTLRNRHLRDERGG
LRLAFTGKSGKMWSLKLSDKRIARIIRSIQELPGQQLFQYIDGAGDRCPVSSQDINDYLR
VTMRSDFTSKHFRTWAATATALELLRCLDLPDSDRAQKQRLNSAIDKVAHMLGNTRTVCR
QSYIHPAIPEHWLAGKLGSQIDAAGAIRLVAPELSDAERRTLKWLLFIDAEKS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaaaaagtcttccgctgttccgctgctacaaaacaatgctgctcatgggttggtc
catgtcagcgacaccgcgccgggaattaggcgcctgcgttgtggagccgggtttcgttat
gttcggtttgacaaaaaggcgatttcagtcgcggatcgaaacaggattgctaagcttgcc
attccgcctgcttggaacgatgtctggatatgttgcgatcagcgcggacatatacaggca
accgggcgtgatacgcgcggaagaaagcaatatcgttatcactccgcgtggatggcgatg
caggaggaaaccaaattttcaagtctgccagatttcgccggtgcactcagccgactgcgc
aaagtggtcgatatcgatatgcggcgacgctcgctctgtcgtgaaaaggtcgttgcgacc
gtcatctggctgatggatcgactattgctgcgggtcggaaatccagattatgcacgcgac
aacaagagctttggggtcactacgcttcgcaatcggcatttgcgggatgagcgtggcgga
ttgcggctcgcatttactggcaaatcgggcaaaatgtggagtctcaagctttccgacaaa
cgaattgcgcgtatcatacgctccatacaggaactgcctgggcagcagttatttcaatat
attgacggggcgggtgatcgctgtcccgtctcctctcaggatataaatgactatctgcga
gtgactatgcggtccgatttcacgtcgaagcattttcgaacttgggctgcaacggcaact
gcccttgagttgctacgctgtctcgatttgcctgacagtgacagggcgcaaaagcaaagg
cttaatagcgcaatcgataaggttgcgcacatgctcggcaatacaagaacggtatgccgg
cagtcttacatacatcctgccatccccgaacactggctggccggaaaacttggctcgcag
atcgatgccgctggagctatccggctagttgcgcccgaacttagcgatgccgagcgtcgc
actttgaaatggctacttttcatcgatgcggaaaagagctga
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