Ochrobactrum sp. EEELCW01: GTN27_14100
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Entry
GTN27_14100 CDS
T07148
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTN27_14100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_14100
Transporters [BR:
ocl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GTN27_14100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QTN04370
LinkDB
All DBs
Position
2:289934..291010
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AA seq
358 aa
AA seq
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MARSINRKSAFLASLALSVSAMTVFAANAAEITVMGYRGAFQDNYVKAVIEPFQKEHPDI
KVTYYGVQNAATSLGNMRAQQSSPQTDAVIYDLSVAKIADEEGLVEKLDPASLKNYADVA
DLGKELAGAAIPITYDTLSLLYNNDAFAQGAPDSWEALWDKQQSGKVIIPAQGGGDIQAI
LLTIIANRLAGEDDYTKTVKPGVDKLVELAPAVQTWEPKPDAYTLVANGTATLSIGYNAR
AQFYFDQTGGKLQSVGPKEGTAAQVNVISAIANGKNMDATKTFIDYAISPETQARFAEIM
FYAPSNTKADVNDETKKRIPYMDAAQREKLIPVNWMTIGDMRDKLLNPWRRQIIPAGR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttcgatcaacagaaaatcggcttttctggcaagtttagcgttgagtgtttcg
gcaatgactgttttcgcagccaatgctgctgaaatcacggtgatgggttatcgcggcgca
ttccaggacaattatgtcaaggccgtcatcgagccgttccagaaggaacatcccgacatc
aaggtcacctattacggtgtgcagaatgcagcgacatcgctcggcaacatgcgcgcccag
cagtcctctccccagacggatgcggtcatctatgacctttcggtcgccaagatcgccgat
gaggaagggctggtcgagaagctcgatccggcatcgctcaaaaattatgcggatgtcgcc
gacctcggcaaggaactcgcaggcgctgcaattccgatcacatatgacacgctttcgctt
ctttataacaacgatgcatttgcgcaaggtgcaccggatagctgggaagcgctctgggac
aagcagcaaagcggtaaggttatcatcccggcacagggcggcggcgatattcaagccatc
ctgcttacgatcatcgcgaaccgtctcgctggtgaagacgactatacgaagactgtgaag
ccgggcgtcgacaagctggtggagctggcgcctgccgtgcagacgtgggaaccgaagccc
gatgcctatacgctggttgcaaacggcactgcgaccttgtccatcggctataatgcccgc
gcccagttctacttcgaccagaccggcggaaagcttcagtcggtcggcccgaaggaaggc
acggctgcgcaggtgaatgtcatcagtgcgattgccaacggcaaaaatatggatgcgacc
aagacattcatcgactatgcgataagccccgagacgcaggcccggttcgccgagatcatg
ttctatgcgccatcgaacacgaaagcggacgtgaacgacgaaacgaagaagcgcattccg
tacatggatgcggcccaacgcgaaaagctcattccggtcaactggatgaccatcggcgat
atgcgcgacaagctgctcaatccctggcgccgccagatcattccggctggtcgttaa
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