Ochrobactrum sp. EEELCW01: GTN27_18305
Help
Entry
GTN27_18305 CDS
T07148
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTN27_18305 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_18305 (xylF)
Transporters [BR:
ocl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
GTN27_18305 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
IMP2_C
Peripla_BP_3
TAT_signal
CbiX
Motif
Other DBs
NCBI-ProteinID:
QTN05146
LinkDB
All DBs
Position
2:complement(1189927..1190946)
Genome browser
AA seq
339 aa
AA seq
DB search
MKRRNFLTGALVAAALGIGAMASTPVYASPENPVIGFSIDDLRVERWARDRDYFIEAAEK
LGAKVNVQSADGNEEKQVKQVENLIAQGVDAIVIVPMNSKVFDAVVADAKASGIKVLSYD
RLILNADIDAYISFDNERVGFMQAEAVLKAKPEGNYYLLGGSPTDNNAKLLRAGQEKALK
EAIDSGKVKVIGSQWVKEWSPTEALSIMENALTAAQNKIDAVVASNDGTAGGAIQALAAQ
GLAGKTAVSGQDSDLAAVKRLIDGTQTVTVYKPLKLIASEAAKLTVQMVKGETPEFNSKL
DNGGKQVDTLLLTPTAVTKDNIDIYVQDGFYTKEQIEGK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgtaattttctgaccggcgcgctggttgccgcggctttgggcattggcgcc
atggcgtccacgccggtctatgcttcgccggaaaacccggtcattggcttttccatcgac
gatcttcgcgtcgagcgctgggcacgtgaccgcgactatttcattgaagcagcagaaaag
ctgggcgccaaggtcaatgtacagtcggctgacggcaacgaggaaaagcaggtcaagcag
gttgaaaacctgattgcgcagggtgttgacgccatcgtcatcgtgcccatgaactccaag
gttttcgatgcggtcgtggctgacgccaaggcatccggcatcaaggttctgtcctatgac
cgtctgatcctcaatgcggatatcgatgcctatatctcgttcgacaatgagcgcgtcggc
ttcatgcaggccgaagccgtcctgaaggccaagccggaaggcaattattatctccttggc
ggctcgccgacggataacaacgccaagcttctccgtgccggacaggaaaaggctctgaaa
gaagctatcgattccggcaaggtgaaggtcattggctcgcagtgggtgaaggagtggagc
ccgacggaagcgctctccatcatggaaaatgctctgacggctgcacagaacaagattgat
gcggttgtcgcttcaaatgacggcaccgccggcggcgccattcaggctcttgccgcgcag
ggactggctggaaagactgctgtttccggtcaggatagcgaccttgccgccgtcaagcgt
ctgattgacggtacgcagaccgttacggtctacaagccgctgaaactcattgcttcggaa
gctgccaagctgaccgtccagatggtcaagggtgaaacgcctgagttcaattccaagctc
gacaatggcggcaagcaggtcgacacgcttctgctgacgccgactgccgtgaccaaggac
aatatcgacatctacgttcaggacggcttctacaccaaggagcagattgaagggaagtaa
DBGET
integrated database retrieval system
