Ochrobactrum sp. EEELCW01: GTN27_18760
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Entry
GTN27_18760 CDS
T07148
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTN27_18760 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_18760 (choX)
Transporters [BR:
ocl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
GTN27_18760 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QTN05231
LinkDB
All DBs
Position
2:1287141..1288085
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AA seq
314 aa
AA seq
DB search
MRYLKIAALAFTALAGLSGAASAADPAACETIRLSDPGWTDITSTNSVASVLLEGLGYKP
DVKTMSVPIGYEALKTGNLDVFLGNWMPAQQKFRDDLDKAKAAEVIVKNLEGAKFTLAVP
DYVASEGVKDFADLAAHADKFGKEIYGIEPGAPANQNIQKIIEDHKFKLDGWKLVESSEQ
AMLAQVDRKNKDKAWVVFLAWAPHPMNNKLKIEYLAGGDDYFGPNFGGAEVYTLGRTGWA
AQCPNAATFFKNLTFTVDIENELMGKILDEGAEGPAAAKEWLKAHPDQIDKWLAGVTTFK
GEPGAEAVKANLGL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacttgaagattgcggcactggcgttcacggcactggcggggctttcaggagcg
gcttctgctgccgatcccgccgcttgcgaaaccatccggctgtccgatccgggctggacc
gacatcacctccaccaactccgtcgcaagcgtgctgctggaaggtctcggctataagccc
gatgtaaaaaccatgtccgtgcccatcggctatgaggcgctcaagactggcaatcttgac
gttttcctcggcaactggatgcccgcacaacagaagttccgtgacgatctcgacaaggcg
aaagccgccgaagtcatcgtgaaaaacctcgaaggggcaaagttcacgctggccgtgccg
gattatgtggcaagcgaaggcgtgaaggactttgccgacctcgccgcccatgcggacaaa
tttggcaaggaaatctacggcatcgagccgggtgcacctgccaaccagaacatccagaaa
atcatcgaggaccacaagttcaagctcgacggctggaagctggtggaatcgagcgagcag
gccatgctcgcgcaggtggatcgcaagaacaaggataaggcatgggtcgtgtttctggcc
tgggcgccgcacccgatgaacaacaagctcaagatagaatatctggcgggtggcgatgac
tatttcggcccgaatttcggcggcgcggaagtctacacgcttggccgcaccggctgggcc
gcacaatgccccaatgccgcaacgttcttcaagaacctcactttcactgtcgatatcgag
aatgagctgatgggcaagattctcgatgaaggtgcggaagggcctgcagccgccaaggaa
tggctgaaggcgcatccggaccagatcgacaaatggcttgcgggcgtcaccaccttcaag
ggcgaaccgggcgcggaagccgtcaaggcaaacctcggtctttaa
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