Ochrobactrum sp. EEELCW01: GTN27_19560
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Entry
GTN27_19560 CDS
T07148
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocl03009
]
GTN27_19560
Enzymes [BR:
ocl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GTN27_19560
Ribosome biogenesis [BR:
ocl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GTN27_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QTN05375
LinkDB
All DBs
Position
2:complement(1470616..1472346)
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AA seq
576 aa
AA seq
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MTKDDDNKDGKRPHGRGGRSDRPGRPDRDTRPRRDDGGRDKPRKFAPRDAEGQEDTGERI
AKRLARAGIASRREAETMIAAGRIAVNGKVLESPAVNVKRTDIITVDGKPLKQTERTRLW
LYHKPAGLVTTNRDPEGRPTVFEALPAEMPRVLSVGRLDINTEGLLLLTNDGGLSRVLEL
PSTGWLRRYRVRAHGKVTQVQLDELKNGIAVDGVFYGSIEATLEREQGANVWISIGLREG
KNREVKNILGALGLTVGRLIRVSFGPFQLGDLEEGAVREIKGRILRDQLGDKLIEDSGAD
FDAPVLNEFSNAAVQGRTRRDVEDEGEEGERRRGPREREWISSSPQRRRGRDDKGAEKVE
PRRRGNANVWMAPGARPKGENAAAKPARVERQVPHRSAKFSGDLQMRPRRAGDEEQGRDE
GGERRYNKRPEGRFDKDARPQRPRPEGNRSEEGRPERREQREDGRKERRPGKRERAELRD
AEGRTVEHSKGGFEGRKTGKPGGPRGEGRFGASDRDTRSGPRSSGPGNKPRRFDDGPKDG
PRRGPGNKPGGKPGGKPGGGKSGGGRTGGGGADRRR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagatgatgacaacaaggatggcaagcgtccgcatggccgtggagggcgctcc
gatcgtcccggtcggccagatcgtgacactcgtccgcgccgcgatgacggcggacgtgac
aagccacgtaaattcgcaccgcgcgacgccgaggggcaagaggacacgggcgaacgtatt
gccaagcgtctggcacgcgcaggcatagcttcacgccgtgaagcggaaacgatgatcgct
gctggccgtattgccgtgaatggcaaggtgcttgagagccccgcggtcaatgtcaagcgc
acggatattattacggtcgacggcaagccattgaagcagaccgagcgtacccgtctctgg
ctttatcacaagcctgcgggtcttgtgacgaccaatcgcgatcctgaaggtcgcccaacg
gttttcgaggcgctgcctgccgagatgccacgcgtactttcagttggtcgtctcgacatc
aataccgaaggtctgttgctgctcaccaatgatggtgggctttcacgcgttctggagctg
ccttccaccggctggctgcgccgctatcgcgttcgcgcccacggcaaggtcacacaggtg
cagcttgatgagctgaagaacggcattgccgtcgatggcgtcttctacggcagtattgaa
gcaacgcttgagcgggagcagggtgccaatgtctggatctctatcggattgcgcgaaggc
aaaaaccgtgaagtaaagaatattctgggcgctcttggtctgactgttggacgtcttatc
cgcgtttcattcggtcctttccagctcggcgatcttgaagaaggtgccgtacgcgaaatc
aagggacgtatcctgcgagatcagcttggtgacaagttgattgaggattcaggcgcagat
ttcgatgcgcctgttctgaacgagttttccaatgctgctgttcagggacggactcgtcgc
gacgtggaagatgagggcgaggaaggcgaacgccggcgtggcccgcgcgaacgtgaatgg
atttccagcagtcctcagcgtcgtcgcggtcgcgacgacaagggagccgaaaaggttgaa
ccgcgtcgtcgcggaaacgctaatgtctggatggctccaggtgcgcgccccaagggcgaa
aatgcggctgccaagcccgcccgtgtcgaacgtcaagttccgcatcgttcagcgaaattc
agtggcgatctgcagatgcgcccgcgtcgagctggtgatgaggagcagggacgcgacgaa
ggtggtgaacgccgctataacaagcgaccggaaggccgctttgataaggacgctcgtcca
cagcgtccgcgtccggaaggaaaccgctcggaagagggacgtccagagcgccgtgagcag
cgtgaggatggacgcaaggagcgtcgtcccggcaaacgcgagcgtgcagaattgcgcgac
gcggaaggccggactgtagagcacagtaagggtggcttcgagggccgcaagacgggaaag
ccgggcggaccgcgtggtgaaggtcgttttggtgcatccgatcgcgatacgcgctcaggc
ccgcgcagcagcggaccgggtaataaacctcgtcgttttgatgatggtccgaaggatgga
ccgcgtcgtggaccgggaaacaagccgggtggtaaaccaggtggaaagccgggtggcggc
aagtcaggcggtggcagaactggaggcggtggtgcggatcgtcggcggtag
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