Ochrobactrum sp. EEELCW01: GTN27_20380
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Entry
GTN27_20380 CDS
T07148
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18902
multidrug efflux pump
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocl02000
]
GTN27_20380
01504 Antimicrobial resistance genes [BR:
ocl01504
]
GTN27_20380
Transporters [BR:
ocl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GTN27_20380
Antimicrobial resistance genes [BR:
ocl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
GTN27_20380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
MCPsignal
Motif
Other DBs
NCBI-ProteinID:
QTN05526
LinkDB
All DBs
Position
2:1652666..1655851
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AA seq
1061 aa
AA seq
DB search
MNFSRFFVDRPVFAGVLSVLIFVAGLIGMTGLPISEYPEVVPPQIVVRAQYPGANPAVIS
ETVATPLEEQINGVEGMLYMQSQATADGVMTLTVTFALGTDPDQAQQLVQNRISQAEPRL
PEEVRTLGVTTAKSSPDLTLVVHLISPDGRYDVNYLRNYAVLNVKDRIARIPGVGQVQIF
GGGDYSMRVWIDPQKAAERGLSASDIATAIRQQNVQAAAGVIGASPSVSGLDLQLSVNAQ
GRLQSPEEFANIVVKSGSEGEITRLGDVARVEMGAADYSLRSLLDNKSAVGMGVFQAPGS
NALEISENVHAAMADLKKTMPEGVDFDIVYDTTAFVKASIESVIHTLLEAIVLVVIVVIL
FLQTWRASIIPLVAVPVSIVGTFAIMYVFGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIEQGLSPVEATYRAMQEVSGPIIAIALVLVAVFVPLAFITGLTGQFYRQFALTIAIST
VISAFNSLTLSPALAALLLRGHDAPKDRLTRIMDKLFGWFFRGFNRFFGASSEAYGRGVG
SILSRKSLVMGLYIVLLGVTFVLFRAVPGGFVPAQDKQYLIGFAQLPDAATLDRSEDVIR
RMSDIALKHPGVANAIAFPGLSINGFTNSSNSGIVFVTLKPFEERKSPELSANAITGELN
QQFGAIQDAFIAMFPPPPVQGLGTTGGFKLQLEDRNGLGFRALDDATKAFLAKAYQTPEL
AGLYSSYQINVPQLYADLDRTKARQLGVAVTDVFETLQIYLGSLYVNDFNAFGRTYSVRI
QADANYRSHAEDIGKLKVRSQSGEMIPLSALLKVEQTVGAERAIRYNGFLSADINGNPAP
GFSSGQAQAAIERIAEETLPPGIAYEWTDLTYQQILAGNSGFLVFPLALLLVYLVLAAQY
ESLALPLSIIMIVPMGIMAALTGVWLTGGDNNVFTQIGLIVLVGLSAKNAILIVEFAREL
ELSGRTVVQAAVEASRLRLRPILMTSMAFIMGVVPLVTSTGAGAEMRSAMGIAVFAGMIG
VTAFGIFMTPVFYVLIRKLSGERPLKHAGAKIEAPHLAPGE
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcacgctttttcgtcgaccgcccggtcttcgctggcgttctgtcggtcctg
atctttgttgccggtctgatcggcatgacaggtctgccgatttcggaatatccggaagtc
gtgccgccacaaatcgtagttcgcgcgcaatatccgggcgccaacccagccgttatttcc
gaaaccgtcgccacgccgcttgaagaacagatcaacggcgtcgaaggcatgctttatatg
cagagccaggcgaccgccgacggcgtcatgacgctgaccgtcacatttgcgctcggcacc
gatcccgatcaggcccagcagctggtgcagaaccgtatttcgcaggccgaaccgcgccta
ccggaagaagtgcgcacccttggcgtcacaactgccaaaagctcgcccgacctgacgctg
gtggttcacctcatctcgcccgatggccggtatgacgtgaactatctgcgcaactatgcc
gttttgaacgtcaaggatcgtatcgcccgtattccgggcgtcggtcaggtgcagatattc
ggcggcggtgattattcgatgcgcgtctggattgacccgcagaaggcagccgaacgcgga
ctttctgcaagcgatatcgccactgccatccgccagcagaacgttcaggctgctgccggt
gtcatcggcgcatcgccgtccgtttcgggcctcgaccttcagctatccgtcaatgcgcaa
ggccgtctccagtcaccggaagagttcgcgaacatcgtcgtaaaatcgggcagcgaaggt
gaaatcacccggctgggcgatgttgcgcgtgtcgaaatgggcgcagccgattattccctg
cgctcgctcctcgacaacaagtcagcggttggcatgggtgtgtttcaggcacccggctcc
aatgcgcttgaaatttccgaaaacgtccatgccgccatggccgacctgaagaaaactatg
ccggaaggcgtggatttcgacatcgtctatgacacgacggcgtttgtgaaagcctccatt
gagtcggtcattcacaccctgctcgaagctatcgtgctggtggtgatcgtcgtcatcctg
tttttgcagacatggcgcgcctccatcattccactggttgccgttcctgtctccatcgtg
ggcacgttcgcgatcatgtatgtgttcggcttctccatcaatgcgctcagcctcttcggc
cttgtgcttgccatcggcatcgtggtcgatgacgccatcgtggtagtggaaaatgtcgag
cgtaacatcgagcagggactgtcaccggtcgaggcaacctatcgcgccatgcaggaagtg
tccgggcccatcatcgccatcgcgctggtgctggtcgcggtcttcgtgccgcttgccttc
atcaccggcctgaccggtcagttctaccgtcagtttgctctcactatcgcaatctcaaca
gtgatttccgccttcaactcgctgacgctttcgcctgctctggcagccctgctgctgcgc
ggtcacgacgcgcccaaggatcgtctgacccggatcatggacaagctgttcggctggttc
ttccgtggcttcaaccgcttcttcggggcaagttcggaagcctatgggcgcggcgttggc
agcattctctcgcgcaagtcgctggtgatgggcctttatatcgtgctgctcggcgtcacc
ttcgtgctgttccgtgcagtgcccggcggtttcgttccggcgcaggacaagcaatatctg
atcggcttcgcgcaattgccggatgcggcaacgctcgatcgttcggaagacgtgatccgc
cgcatgagcgacatcgcgctcaagcatccgggcgtggccaatgccatcgccttccccggt
ctgtcgatcaatggctttaccaactcgtcgaactccggcatcgtcttcgtgacgctgaag
ccgttcgaggaacgtaaatcgccggagctttcggccaatgcaattacgggagaactgaac
cagcagttcggcgccattcaggatgccttcatcgccatgttcccgccgccacccgttcag
ggtctcggcacaacaggcggtttcaagctccagcttgaggatcgcaacgggcttggtttc
cgtgcgctggacgatgcaaccaaagcgtttctcgccaaggcctatcagacacccgaactg
gctggtctctattcgagctaccagatcaatgtgccgcagctttatgccgatcttgatcgt
acaaaagcacgtcagctaggcgtggcggtgaccgatgtgttcgaaacccttcagatttat
ctgggttcgctctatgtcaacgactttaatgcctttggacgtacctatagcgtgcgcatt
caggccgatgcgaattaccggagccacgccgaggacataggcaagctgaaggttcgttcg
cagtcgggcgagatgatcccgctgtcggctcttctgaaggtggagcagacggtgggtgcg
gaacgcgccatccgttataacggcttcctttctgccgatatcaacggtaacccagctccc
ggattctcgtccggccaggcacaggctgccatcgaacggatcgcagaagaaaccttgcct
ccgggcatcgcttacgagtggacagacttgacctaccagcaaattctcgccggcaactca
ggcttcctcgtcttcccgctggcgctgctgttggtctatctggttctggccgcccaatat
gaaagccttgccctcccgctatcgatcatcatgatcgtgccgatggggatcatggccgca
ctcaccggcgtctggttgacgggaggcgacaacaacgtcttcacccagatcggcttgata
gtccttgtggggctatcggcgaagaacgcgatcctgatcgtggaattcgcccgcgagttg
gagctgtccggacgaaccgtcgtacaggcggcggtcgaggcaagccggttgcgtctgcgc
ccgatcctgatgacctcgatggccttcatcatgggcgtggtgcctctggtgacgtcgacc
ggtgccggtgcggaaatgcgctcggccatgggcatcgcggtctttgcaggcatgatcggc
gtgacggccttcggcatcttcatgacaccggtgttctatgtgctgatccggaagctctcc
ggtgaacgcccgttaaagcatgcaggtgccaagatcgaagccccgcatctggcgccgggg
gaataa
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