Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364534
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Entry
139364534 CDS
T10872
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139364534
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139364534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139364534
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
SR proteins
139364534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_3
SET_assoc
DUF2457
Motif
Other DBs
NCBI-GeneID:
139364534
NCBI-ProteinID:
XP_070957435
LinkDB
All DBs
Position
13:32301125..32319025
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AA seq
245 aa
AA seq
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MSRHGRNGGDAKVYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDA
EDAVRGLDGKLISGSRVRVELSTGMPRRSRYERAPTNRPFDSNDKCYECGERGHYAYDCH
RYSRRRRSRSRSHSRSGGRRYSRSRSRDRGRRSRSFSPRRSRSPRRSRALTPKRSRSRSK
SRSRSRSLSRAKTRSGSPTRRYAEVLSLTPIFFPPFSSLNELWNSLTMHDKQQNVTMKLL
SIYTV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacacggtcgaaacggaggagacgctaaggtttacgtcggtaacctgggcact
ggtgcagggaaaggagagctagagcgggcgtttgggtattacggacccttgagaacagtg
tggattgctaggaaccccccagggtttgcctttgtggagtttgaagacacccgggatgca
gaagatgcggtccgtggccttgacggcaagttaatttctggatctcgagttcgagttgaa
ttatctacagggatgccgcggcgatctcggtacgagcgtgcgcccaccaaccggcccttt
gactccaacgacaagtgctatgagtgtggtgagcgggggcactatgcctacgactgccac
cgctacagtcgacgcaggaggagcaggtcccggtctcactccaggtccggtgggaggagg
tactctcgctctcgcagccgggaccgtggcaggagatcaagatccttctctccacgccgc
tctcgttctcctagaagatcgagagcccttacccccaagagatcaagatctcggtcaaag
tccagatcaaggtctaggtcactttctcgtgcaaagaccaggtctggttcccccacgagg
aggtatgcagaagtattgagtctgaccccaattttcttcccaccattctcctctctaaac
gagctatggaacagtttgacaatgcatgataagcagcaaaacgtgacaatgaaattgttg
tctatctatacagtttaa
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integrated database retrieval system
