Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364537
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Entry
139364537 CDS
T10872
Name
(RefSeq) signal-induced proliferation-associated 1-like protein 2 isoform X1
KO
K17702
signal-induced proliferation-associated 1 like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
SPAR_C
Rap-GAP_dimer
PDZ
PDZ_6
ZapB
Astro_p19
Motif
Other DBs
NCBI-GeneID:
139364537
NCBI-ProteinID:
XP_070957444
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All DBs
Position
13:complement(31186112..31298453)
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AA seq
1709 aa
AA seq
DB search
MQSDNLFNKKLQALKGPMGPPNANVQGTPAMPKMGVRARVSDWPQRKDGWESEPPPRYDS
LVPTFQKGPSNLSTEVILQKNQELLSAKFPETKYPLCDLLSHSPMKGFPGIKRSNSEVTI
SDIGAEDLDHTTINPNTGATLRREYGSTSSLDKQSLSGASEGFVGTLRGYHMEDRSDQPR
VPPPQSFPELLRLNTTLSSSLQTAAQIARGDIVCIPGYDYVDSSLLYSREREKSFIQRMK
AEKADTSIFRRLRNVKSEGEYLDQEYGGRFGRPLSFQKCFAHYDVQSVLFNISEAVANRA
DLGRRKNTTTGASAASQCQAPASGLGDSATPMPICESPVGSCEDLGHKASMDADEGDGKS
NTLVLSCPYFRNETGGEGERKVALSKASSASYGSGDYAANYGGGGQGYSVESSLSTRCTN
AGVSVLEVPRESQAFHRDMYKRYIIEHIDQGAYYYHKYFYNKDHQNYFGTDENLGPVAVS
IRREKLDEGKEGAQYNYRVTFRTSELTTLRGAILEDAVPSTAKHGMARGLPLKEVLEYVV
PELNIQCLRLATSSPKVPEQLLKLDQQGLSFQHKVGIMYCQAGQSTEEEMYNNESASPSL
EEFLELLGQRVRLKGFTKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVSTLLPYTPNNRQ
QLLRKRHIGNDIVTVIFQEPGALPFTPKNIRSHFQHVFIIVRVHNPCTENVCYSVAVTRS
KDVPAFGPPIPQGVLFPKSAMFRDFLLAKMMNGENAVHKSDKFRAMAMRTRQEYLKDLSE
NFVSANPVDSSAAKFSFISLGVKKKERSRPRRNAHLQSYGAVTWAVVARDFGQSADIGCL
LAVSNEFVVLIEEASKEVVFNCYCRDVLGWSATSGSVRLFYERGECVVFSTQEGCLDDVR
EIMQRLEIVTRGCETVEMTLRRNGLGQLGFHVNFEGVVADVEPFGFAWQVGLRPGSRLME
ICKVAVATLSHEQMIDLLRTSNTVSVVIVQPHEDGTPRRSCSEMYRIPVVEYKTTTAAGW
HRVSAAPGGGPSMSRTSPTQGPSPGQQMFHYAQGAISRSTSFDRKQQDGTRVLQEYEISP
TASCSSREPGQLYCSSPSNQSTSSDPGPCGTWSQKAGCINGCQSPALLLDQPSDKEGEGR
REREPKLERTRSAEAKWHHPSTKILNMRERSQPRPGAKDSPNKYQHSGSSHSSSNTLSSN
ASSGSSDDKRFGSGDPMDPDALGLIYIKGASTDSGIDTAPCMPPPPPPLPGCGGGGVPGV
SAGRPVPQNARGEQWVLEYHGAGGYHGAGTPEGGLTSQGYSTQATSAGHVTDGSLGDLSE
ISSMSSGSRHSGSPSERGPKTSTSVDSSKVYIVSSGGTVTGAGLNDPIHARQSPGKEYLI
GWKKAVDGSPMEDLGRPKDYGLRAMLGADSQVQPSLTREAFLKMMLPDSPPGEGGRGKSL
TGPGGLPMSPRRSLYRTLSDESLCSSYRKNLSLVSSRSSLLDQALPNDILFSTPTEPHHS
TLPPRVNLGHSHGAPLHKNELWFSDSSLADRCKMADGSLMPLPEAVSGLDWSHLVDAARA
FEELSYALYLEGLQLDKDTSRLCDKDCPKDSLAADQGSLCSMLDVEQAQQAMELSRELSR
RVAASEAAALEAGDGSPALLTGKVIQLEEILRQLQFDLRKEQEDKAMLQEQVQHLRQDNM
RLHEESQTAAGQLRRFSEWFLNSVDNKKP
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggataacctgttcaacaagaaactccaagcgttaaaggggcccatgggacct
ccaaatgccaacgtgcaaggaacgccagccatgcccaagatgggtgtccgggcgagggtg
tcggactggccccagcgaaaggacggctgggagtcagaacctccaccacgctatgacagc
ctggtgccgaccttccagaagggaccgtcaaatcttagcacagaggtcatcctccaaaag
aaccaggagttactcagtgccaagttcccagagaccaagtatccgctgtgtgacctcctg
agccactccccaatgaagggcttccctgggatcaagaggagcaacagcgaggtcaccatt
agtgacatcggcgccgaagacttggatcacaccaccatcaaccccaacactggggccacc
ttgcgccgtgagtatggcagcacgtcctctctcgacaagcagagtctgtccggcgccagc
gaaggctttgtgggaaccctgagaggctaccacatggaggaccgctcagaccaaccccgc
gttcctcctccacagagtttcccggagttgctgcgtctcaacaccaccctgtcatccagc
ctacagacggccgcccagatcgcgcgaggtgacattgtctgcatcccgggctacgactac
gtggacagctccctgctctacagccgtgagcgggagaagtccttcatccaacgtatgaag
gcggagaaggccgacacctccatcttccggaggctgcggaatgtgaagagcgagggcgag
tacctggaccaggagtacggagggcgcttcggaaggcccctgagcttccagaagtgcttt
gcccactacgatgtgcagagcgtcctcttcaacatcagcgaggcggtggccaaccgcgct
gacctgggtcgcaggaagaacactaccactggggcatcggctgcctctcagtgccaggcg
ccggcttctgggctgggagacagcgccacacccatgcccatctgtgagtcacccgtaggc
agctgcgaggacctgggccacaaggccagcatggacgcagatgaaggggatgggaagagc
aataccctggtgctcagctgtccgtacttccgaaacgagactggtggcgagggcgagagg
aaggtggccctgagcaaagccagcagcgccagctatgggagtggagactatgctgctaac
tatgggggtggaggacaaggctactctgtggaatcatcgctcagcacccggtgcaccaac
gcaggggtgtcggtgctcgaggtgccaagggagagccaggctttccacagggacatgtac
aagcgctacataatcgaacacattgaccaaggggcttactactaccacaagtacttttac
aataaagatcaccagaactactttggcacggatgagaacttgggccccgtggcggtcagt
atccgccgggaaaagctggatgagggaaaggagggagcacagtacaactaccgggtaacc
ttccggactagcgagctcaccactctccgaggggccatcctggaagacgccgtgccctcc
accgctaagcatggaatggccaggggcctaccgctgaaggaggtgctggagtatgtggtc
ccagagctgaacatccagtgtctcaggctggccaccagctcccccaaggtccctgagcag
ctcctcaagctggaccaacaggggttgagtttccagcacaaggtgggcatcatgtactgc
caggcgggccagagcaccgaagaggagatgtacaacaacgagagtgccagcccttccctg
gaggagttcttggagctgctgggccagagggtcaggctgaagggcttcaccaagtaccgg
gcccagctggacaacaaaacggattccactggaacacattctctctacactacttacaaa
gactatgagctgatgttccacgtgtccacactgctcccctacacccccaacaacagacaa
cagctactgaggaagaggcacattggaaatgacatcgtcaccgtcatcttccaggaacct
ggtgctcttcccttcacccccaaaaacattcgctcacacttccagcacgtgttcatcatc
gtcagagttcacaacccttgcacagaaaatgtttgctacagtgtggcggtcaccagatct
aaagacgtgcccgcctttggtcctcccatcccccagggggtgctcttcccaaagtcggcc
atgttccgggacttccttctggccaagatgatgaacggtgagaatgcggtgcataagtcg
gacaagttccgcgccatggccatgcgcacgcgccaagagtacctgaaagatttgtccgag
aactttgtaagcgccaaccccgtggactcttcagcggccaagtttagcttcatctcgttg
ggtgtcaagaagaaggagcgcagccgaccccggcggaacgcccacctccagagctacggg
gcggtcacttgggccgtggtggcccgggactttggccagtcggcggacattggctgcctg
ctggccgtctccaatgagtttgtggtgctgatcgaagaggcgtccaaggaggtggtgttc
aactgctactgccgcgatgtccttggttggagcgcaacatctgggagcgtccggctcttc
tacgagcgaggcgagtgtgtggtgttctccacgcaggaaggatgcttggacgacgtccgg
gagatcatgcagaggttggagattgtcacccggggctgcgagacagtggagatgaccctt
cggcggaacggtctgggccagttgggattccacgtcaacttcgagggcgtggtggcggac
gtggagcctttcggcttcgcctggcaggtgggtctccgtccgggcagccggctgatggag
atctgcaaggtggctgtggccacactatcccacgagcagatgatcgacttgctgcgcacg
tccaacacagtcagtgtggtcatcgtccagccccacgaagacggcacgcccaggaggagc
tgctcggagatgtaccgcatccccgtggtggagtacaagaccaccacggctgccggctgg
caccgcgtctcggcagccccgggtggtggcccatccatgtcccggacctcccccacacag
ggccccagccccgggcagcagatgttccattacgctcagggggccatctcccgcagcacc
tccttcgacaggaagcaacaggacgggaccagggtactgcaggaatatgagatctcccct
acggcctcctgtagcagtcgggaaccaggacaactgtactgcagctcccccagcaaccag
tccacgtccagtgaccccggaccctgtggcacctggtcccagaaggcgggatgcattaac
ggatgccagtcccctgcactgctcctggaccagccgagcgacaaggagggagagggccgg
agagagagggagcccaagctggagaggaccagatctgcagaggccaagtggcaccatccc
tccacaaagattctgaacatgagggagagaagccagccgagaccaggagcaaaggactcc
cccaataaataccaacattctggctccagccactccagcagcaacacgctctccagcaat
gcctccagcggcagcagcgacgacaagcgctttggctctggtgaccccatggaccccgat
gccctgggcctcatctacatcaagggcgcgtctaccgacagcggcatcgacacggcacct
tgcatgcccccgccacctccccctctacccggctgcggcggaggtggtgtaccgggggtc
tcggctggccggccagtcccccagaatgcccgaggggaacagtgggtgctggagtaccac
ggggcggggggttaccatggagcggggacgccggaaggaggattgacgtcacaaggctat
agcacccaggccacttcggctgggcacgtaacggacgggagcctgggcgacctgagtgag
atttcctccatgtccagtggctcgcggcactcaggcagcccctcggaacgtggtcctaag
acctccacctcggtcgactcctccaaagtctacatcgtctcctccggcggcacggtgaca
ggggcggggcttaatgatcccatccacgcccgccaatcaccaggcaaagagtatctgatt
ggctggaagaaagccgtggatggctctccaatggaggatctgggcaggccaaaagactac
gggctgcgggccatgctgggtgcagacagccaggtccagcccagcctgaccagagaggcc
ttcctgaagatgatgctgcccgacagtccccctggggagggggggcgtggcaagagtctg
actggtcctggcggcctccccatgtccccacggaggtccctgtaccggaccctgtcggat
gagagcctgtgcagcagctacaggaaaaacctgtccctggtcagctctcggagctctctc
ctggaccaggccctacccaacgatatcctgttcagcacccccactgagccacaccacagc
accctgccacctcgcgtgaacctcggccacagccatggggcgccgctacacaagaatgag
ctgtggttctctgacagctccctggccgaccgctgcaaaatggctgatggcagtctgatg
cctctcccggaagcagtgtctggcctggactggtcccatcttgttgatgccgcaagggct
tttgaagaattgtcctatgctctctatctggaaggtctgcagctcgacaaggataccagt
cgtctgtgtgataaagactgtccgaaagactcactagcagcggaccagggttcactctgc
tccatgttggacgtggagcaggcccagcaggccatggagctgtcccgtgagctgagtcgg
agggtggctgcgtcggaggctgccgctctggaggcaggggatggttctcctgctctgctc
actggcaaagtcatccaactggaagagatcctcagacagcttcagttcgacctgcgaaag
gagcaagaggacaaggccatgttgcaggagcaggtccagcacttgcgtcaggacaacatg
cgtctccacgaggagagccaaacggcagccggccagctcaggaggttcagcgaatggttc
ctaaactcggtcgacaacaagaagccctga
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integrated database retrieval system
