KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364546
Entry
139364546         CDS       T10872                                 
Name
(RefSeq) bromodomain-containing protein 4-like isoform X1
  KO
K11722  bromodomain-containing protein 4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ocla01001]
    139364546
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139364546
   03036 Chromosome and associated proteins [BR:ocla03036]
    139364546
Protein kinases [BR:ocla01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   139364546
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     139364546
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    139364546
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 139364546
NCBI-ProteinID: XP_070957457
LinkDB
Position
13:33066625..33118466
AA seq 1637 aa
MDYKMHAKSNDLLDFQTLDALLEKIAHYSSVSVKREPSEECNGIIGALSVESSAPPSRLN
NWCPAASAAPTPTLTPAPAPVPAPPVTSARMGDGLDATTVQMSSSGSSSSSQGVQPQPST
YVPTVPEFNPPPPEYINSSQPKRQTNQLQYLLKVVLKTLWKHHFSWPFQAPVDAVKLNLP
DYYKIIKVPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEQLEK
MFLQKITEMPQDETEIAVMTGKGRGRGRREGGLNLKPGPTMDSPSTTPQTRGFSSHSPGP
QTRGPPVQQQTQDQGPPSLPPQPLMQALPSRVPPTLPVHTHAHAPQLGAPYSLGPSDLPL
QAPPKLPIMTSVPPPPTQTTLPPTSIQSTAPILQNPVPMAKQRKSQKRKADTTTPTANDQ
LSESSPAESKSGKTLPRRESARPTKLIKKEAPDSQHHLGLGIGLGLGGPGGPGVGAHSPK
QQEQLRYCSSLVRDMLHKKHAAYAWPFYKPVNVDMLGLHDYHDIIKHPMDLATVKLKLDN
RQYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARRLQDVFEMRFAKMPDEPEEMLASAP
APVLLQSSAPIIKAQPPPILNPASSILGPASVKHPASSSDSSSDSSSESESSTNDLEEER
AQRLAELQEQLKAVHEQLAALSQPQASKPKRKEKEKKKDKHKRKGAVEEIPEPAIQFPKK
TKNNNSSSNNNKELLPKKTKKPSKKEGGAVKNNHSAALGPQAALQPPALQPVSGLGEGLE
DDPAAAGAPGEKGRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDEIEI
DFETLKPSTLRELERYVSSCLRKNKKKVPVAEKTMEAMTAAKIKASSSSDSDSSDSSSSD
SDEEKGIPPKQKQKKGHGTNEGKKPHLHHTMSGAGPLPHGIPHPQGHPHPQGHPHPQGHP
HPQGPVLQPSIHLKQQQHHNPSPVTYMAPPPVTVTALESSQLLENTFDLLPHFGQQPLMH
LSQHHHSSSPALPPHLNVHSAAGPVSPETHPFLNQHPIHANPNPALHNALPQQPSRPSHR
AAALPPKPPQQQQPATQPTLILQQQQQLQPQAPPPQHHLQPHILHPTPPQSLQQRPLSPP
SLTPQGLMSSLPPQMLLEDDEEVIPPLPLSQVHLYLQQLQQGQSQGRPGQQPHNPQQIMQ
SLQIRQQQQNQAPLLQSVQVQPSQPSLQPPQLSVQLPQPQSKPTPPSRQPQQILPPHQVA
RHLQQHAQMGYPSQGPGAQQTGQSDRHAAAGQHKGSMQSSTKAQHIIQQHLSPRQIKADP
YNSGHLRENPSPIMMHSPHLPQYPPITHQSPPHNLQPKKEQRAPPALVGLKEEKLPPSPV
MRGGEPFSPAMRQDPHKHLDCHSKPSLPGHTQQNVKSMDSSRPVIRSSEPSGPPSSLPDK
DKFKQEPKTPVAPKKVQDVKLKNMGSWASLAQKPTSAPLSAVKSSSDSFEQFRRAAREKE
EREKALKAQAEQAERDKLRREQEKLRGRDRDDEDILEPQQQSRRVHEEPRSRRLEQQQHI
QAPQPQQQPQAPAPQAQPAALPQPPQAPTPPQPSAQDQQRELARRREQERRRREAMAATI
DMNFQSDLMAIFEENLF
NT seq 4914 nt   +upstreamnt  +downstreamnt
atggattacaagatgcatgctaagtctaacgatctgctggattttcagactctggatgcg
ctcttggaaaaaattgcacattattcttctgtctctgtgaaaagagagcctagtgaggag
tgcaatggaatcatcggtgctctctcagtggagtcgtccgcgccgccgtcgagactaaac
aactggtgtcccgcggcctccgccgcccctaccccaacccttacccctgctccagcccct
gtgcccgcgcccccagtcacctctgcaagaatgggggacggcctggacgcaaccacagtg
cagatgtcttcgtcgggcagcagtagtagcagccagggggttcagccccagccatccacc
tacgttccaaccgtgccagagtttaacccgccgcccccggagtacatcaactcatcgcag
cccaagcggcagaccaaccagttgcagtacctgctgaaggtggtgctgaagaccctgtgg
aagcaccacttctcctggcccttccaggcacccgtcgatgctgtcaaactcaacctgccg
gactactacaagattattaaagttcctatggatatgggaacaatcaagaagcgacttgag
aacagctactactggaacgcccaagaatgtattcaagatttcaacaccatgttcaccaac
tgctacatttacaacaagcctggagatgatatagtgttaatggctgagcagctggagaag
atgtttctccagaagattactgagatgccccaggacgagacagagattgctgtcatgacc
ggcaagggacgaggccggggccgacgggaaggaggtctgaacttgaagccaggcccgact
atggattctccgtccaccaccccccagacacggggcttctccagccactccccaggccct
cagaccagaggaccaccagtgcagcaacagacccaggaccaggggccaccatctctacct
cctcagcccctcatgcaggccctgccctcccgcgtgcccccaacgctacctgtccacacc
catgcccatgcgccacagctgggggccccctactcactgggcccgtcggacctgcctctc
caggcccctcctaagctcccgattatgacctccgtgcctcctccacccacccagaccact
ctgccccccacctccatccagagcactgcccccatactgcagaaccccgtgcccatggcc
aaacagagaaagagccagaagaggaaagcagacacgaccacccccacggccaacgaccag
ctgagtgagtcttctccagccgagtccaagtcggggaagacgctgccgcgacgtgaaagc
gccaggcccaccaagctaatcaagaaggaggctccagactcccagcaccacctgggcctt
gggataggtctcggtctagggggacccggaggaccaggggtaggggctcatagccccaag
cagcaggagcagctacggtactgctccagcttggtccgagacatgttacataagaagcac
gcggcctacgcctggcccttctacaagccagtaaacgtggacatgctggggctgcacgac
taccacgacatcatcaaacaccccatggaccttgccaccgtcaagttgaagctggacaac
aggcagtacagagacgcccaggagtttgctgccgacgttcggttaatgttctctaactgc
tacaagtacaacccacccgaccacgaggtggtggctatggcacgcagactacaggacgtg
tttgagatgcgcttcgccaagatgccagatgagcccgaggagatgttggcttcggctcct
gcccccgtgctgctccagtcctccgcccccatcatcaaggcccagccgccgcccatccta
aaccctgcctcttccatcctaggtcctgcctcggtcaaacaccccgcttcctcctcggac
agctccagtgattcgtcttctgagtcggaatcctccacaaacgacttggaggaggagaga
gcccagagactggccgagctacaagaacagctcaaagctgtccacgagcagctggcggcc
ctctcgcagccacaggccagcaaaccaaagagaaaagagaaggagaagaagaaagacaag
cacaaaaggaaaggagcggtggaggagatcccggagccggccattcagttccccaagaag
accaagaacaacaacagcagcagcaacaacaacaaggagctcctgcccaagaagaccaag
aaacccagtaagaaggagggaggtgcggtgaagaacaaccactctgcagccctgggccct
caggcagcgctgcagcccccagctctgcagcccgtgtcgggcttgggggagggcctggag
gacgacccggctgcagctggagcccctggggagaagggtaggcccatgtcgtatgaggag
aagaggcagctgagtctggacatcaacaagctgcccggcgacaagctgggtcgtgtggtc
cacatcatccagtccagagagccctcgctgaagaactccaaccccgacgagatcgagata
gactttgagacgctcaagccgtccacgctgagagagctggagagatacgtgtcgtcgtgc
ctccgcaagaacaagaagaaggttcctgtggcagagaagaccatggaggccatgactgcc
gccaagatcaaggccagctcctcctctgactccgacagcagcgactccagctcctcagac
agtgatgaggagaagggaatccctcctaaacagaaacagaagaaaggccacgggaccaac
gaagggaagaagccccatctccaccataccatgtctggagctgggcccctcccccatggc
atccctcacccccagggccaccctcacccccagggccaccctcacccccagggccaccct
cacccccagggtcctgtcctgcagcccagcatccacctgaagcaacaacagcaccataac
ccctcccccgtcacctacatggcccctcccccggtaacggtcacggcgttggagtcctcc
cagttgctggagaacacgtttgatttgctgccccacttcggccagcagccactcatgcac
ctgtcccagcaccaccactcctcgtcgcctgccttgcccccccacctcaacgttcactcg
gcagcggggccggtgtccccggagacgcacccctttctcaaccagcaccccatccacgcc
aaccctaacccagctttgcacaacgccttaccccagcagccatctcgacccagccacagg
gcagcagctctacctcccaaacccccgcagcagcagcaaccagcgacccagccaacccta
atactacaacaacaacaacagctccagccacaagcccctccaccccagcaccacctccag
ccccacattctccatcccacccccccccaatccctgcagcagcggcccctttcccccccc
tccctcacccctcagggcctgatgtcctccctgcccccccagatgctcctggaggacgat
gaggaggtgattccgcccttacccctcagccaggtgcatctctacctgcaacagctccag
cagggacagagccagggaagacctggccaacaaccacacaatccccagcagatcatgcag
tctctccagattcgccaacaacaacagaaccaggctcccctcctgcagtctgtacaggtc
cagccctcccaaccctctcttcagccaccccagctctcagtccagcttccccagccccag
tccaaacccacccccccctcgcgccagccccagcagatcctacccccgcaccaggtagcc
cgccacctgcagcagcatgcacagatgggttacccctcccaggggcctggggcgcagcag
acgggtcagtcagacaggcacgccgctgcagggcaacacaagggttccatgcagtcctcc
accaaagcacagcatatcatccagcaacacctctcccctcgacagatcaaggctgatcca
tacaacagcgggcacctaagggagaacccctccccaatcatgatgcattccccccacctc
ccccagtatccccccataacgcaccagtctccgccacacaacctgcagcccaagaaagag
cagcgtgcgcccccggccctggtaggcttgaaagaagagaagttgcctccctctccagtg
atgagaggaggagagcctttcagcccagccatgagacaagaccctcacaaacacctagat
tgccacagcaagccctctctaccaggtcacacacagcagaatgtaaagtcgatggacagc
tctcggccggtcatccgttcctcagagcccagcggtcctccctcctccctgccagacaag
gacaagttcaaacaggagcccaaaacgcccgtcgcgcccaaaaaggtacaggatgtgaaa
ctgaagaacatgggttcgtgggccagcctggcccagaagcccacgtcagcgcccttgtct
gcagtgaagtcgtctagcgacagcttcgagcagttccgccgggccgcccgggagaaagag
gagagagaaaaggctcttaaggcccaggcagagcaggctgagagggacaaactgcgccgg
gagcaggagaaactacgtggtcgtgacagggatgatgaggatatcctggagcctcagcag
cagtcgaggagggttcatgaggagcctcgaagcagacgtctggagcagcagcaacacatc
caggccccccaaccccagcagcaaccccaggcaccagccccccaagcccagccggctgcc
ctcccccagcccccacaggcccccacgccgccccagccctcagcccaggaccagcagagg
gagctagcgcgacgccgcgagcaggagaggaggaggagagaagcgatggcggcaaccatt
gacatgaatttccaaagcgacctgatggctatctttgaggagaacttgttctga

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