Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364618
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Entry
139364618 CDS
T10872
Name
(RefSeq) F-box/LRR-repeat protein 19-like isoform X1
KO
K10285
F-box and leucine-rich repeat protein 19
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139364618
04121 Ubiquitin system [BR:
ocla04121
]
139364618
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
139364618
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139364618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_4
LRR_6
Motif
Other DBs
NCBI-GeneID:
139364618
NCBI-ProteinID:
XP_070957605
LinkDB
All DBs
Position
13:36996461..37020049
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AA seq
848 aa
AA seq
DB search
MSGSKALGGARRRRTRCRRCQACMRTECGECHFCKDMKKFGGPGRMKQSCLLRQCTAPVL
PHTAVCFSCGEAGKEDTVDTEEEKFSLSLMECTICNEIIHPSCLKMGKAEGIINDEIPNC
WECPKCHKEGKTSKDGGDGSGKRRMDNGEVGRWKLTDDPPPTKKKPPSLEDGGRQDGHKR
KKEKELPQDSGPKKKMKGAHEKRLKKKQKPNVSETAESNGPNSSTGGSQGSGGGSNTTQS
PTSTASQDQRSHHREKLERFKRMCQLLERVRESSSSSSSSSESDSESDSDSPSGSDGRRG
SEPSSPVPVAYSNSARERNRERDRERDRRLAELGFSASEDSEGSVKEEEEEDAVEEQVVG
DKPRRRGEGPPRGRKGLTTDGNDEESGERSRKSTPLPPPSPLSSTQPPPSSGHGPSPGSE
GFSGKRSNGSETRNGRTRAGVRDRETQEKENANNSGGSVANHRYGTGKGNKGNKIRNNKQ
TGSQPTSRNSSNSSASTATTTSNGGGGGLLGPGSNSSGGMSALAASPRSQPSRMAPRSQM
MKRSPPAVPSPPRPVQMERHLVRPPPACPEPHCLPLDTGSSHVMPRDVWLRVFQHLSQRE
LCVCMRVCRTWSRWCCDKRLWTQIDLSRQRSITPPMLSGIIRRQPVSLNLSYTNISKKQL
MWLINRLQGLLELNVSGCPWSSVSALCQAACPCLRLLDLSRVEDMKDSHLRELLAPPTDT
RTAHGESRGGRFQNVTELRLAGLDLTDVTSRLLVRYLPHLTKLDLSQCGNITDQTIHTLT
SPMSPLKDSLAHLNLAGCVKVTEQCLPLLRRCASLQSADLRSCTLLTPDVCQLLSFPCPD
DRVLLKNS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagtaaggctctgggaggggcacggcggcggcggacgcggtgccggcgctgt
caggcctgcatgcggaccgagtgcggcgagtgccacttctgcaaggacatgaaaaaattt
ggcgggcctggaaggatgaagcagtcctgtctgctccgacagtgcacagcgcctgtgttg
ccccacacagcggtgtgcttctcgtgtggggaggcagggaaggaggacacagtggacaca
gaagaagagaagtttagcctctctctgatggagtgtaccatctgcaacgagatcatccac
cccagctgcctcaagatgggtaaagcagaaggtatcataaacgatgaaatcccgaattgt
tgggagtgtccaaaatgccacaaggaaggcaagaccagtaaggacgggggtgatggttca
gggaagaggcggatggacaacggggaggtgggccgatggaagctaacagacgatcctccg
cccaccaaaaagaaacccccctctttagaagacggggggcggcaggacggtcacaagagg
aagaaggagaaggagcttccccaggacagcggccccaaaaagaagatgaaaggggcacat
gaaaaacgcttgaaaaagaaacagaagcctaacgtgtcagagactgcagagtccaatggg
cccaactcctccaccggaggcagccagggttccggagggggttccaacaccacgcagtcc
cccacctccacggccagccaggaccagcgctcgcaccaccgcgagaaattggagcgcttc
aagcgcatgtgtcaactccttgagcgtgtccgcgagtccagctcatcgagctcgtctagt
tccgagtctgactcggagtccgactctgactcgccttccggttcagatggccgtcgcggc
tctgaaccctcctcccccgtacccgtcgcttatagcaacagtgcgagggagcgcaaccgg
gaacgggacagggagagggacaggaggctggcggagctgggcttcagtgccagtgaggac
tctgagggaagtgttaaggaggaggaagaggaggatgcggtggaggagcaggttgtggga
gacaagcctcggcgtaggggggagggacctccacggggccgcaaggggctcacgacggac
gggaatgacgaggagagcggggagaggagtcggaagtctaccccattgcctccaccctcc
cctctctcctccactcagcctccaccttcgtccggccacggtccctcgccaggttccgag
ggcttctccggtaagcgcagcaatggctccgagacgcgcaatggacggacacgggcaggg
gtgagggaccgggagactcaggagaaggagaacgccaacaatagcggcggctcggtggcc
aaccaccgatacggaactggcaaaggcaacaagggcaacaagatccgtaacaacaagcaa
acagggtcccaaccaacgtcgaggaacagtagcaactcttccgcttctactgccactacc
acatccaacgggggagggggggggctgctgggcccaggcagcaactcctcagggggcatg
tcagccctcgccgcctcaccccggtcacagccttcccggatggctccacgctcgcagatg
atgaaacgcagcccccctgctgtgccctcacctccccggcctgttcagatggagcggcac
ttggttcggccaccgcccgcctgtcccgagccccactgcttgcccctggacaccggctcc
tcccacgtgatgccccgcgacgtctggctccgcgtcttccagcacctcagccagagggag
ctgtgcgtctgcatgagggtctgtcggacatggagccggtggtgctgtgataagagattg
tggactcagattgacctcagccggcagcgctccatcacccctcctatgctaagtggtata
atccgcaggcaaccagtctcccttaacctgagctataccaacatctcgaagaagcagctc
atgtggctcatcaaccgtctacaaggtctactggagctgaatgtgtcgggctgtccctgg
tcctctgtgtcggccctgtgtcaggctgcttgtccctgcctgcgtctgctcgacctcagc
cgggtagaagacatgaaggactcgcacctgagggagctactggcgccccctactgacact
cggacagctcatggagagagcagaggggggaggttccagaacgtaacggagcttcgattg
gccgggctggacttgacagatgtcacgtcccgcctcttggtgcgctacctgccccacttg
accaagctggacctgagtcagtgtggcaacatcacggaccagactatccacacactgacc
tcccccatgtctccactgaaggacagcctcgcccacctcaacctggcaggctgtgtgaag
gtgacggagcagtgcctgcccctgttgcgccgctgtgcctccctacagagcgctgacctg
cgctcctgcaccttgctcacccccgatgtctgtcagctcctctccttcccttgccctgac
gatagagtgctgctcaagaacagctaa
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