Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364650
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Entry
139364650 CDS
T10872
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03266
Virion - Herpesvirus
ocla04081
Hormone signaling
ocla04145
Phagosome
ocla04148
Efferocytosis
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
139364650
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139364650
04512 ECM-receptor interaction
139364650
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139364650
04148 Efferocytosis
139364650
09144 Cellular community - eukaryotes
04510 Focal adhesion
139364650
09142 Cell motility
04820 Cytoskeleton in muscle cells
139364650
04810 Regulation of actin cytoskeleton
139364650
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139364650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139364650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139364650
04515 Cell adhesion molecules [BR:
ocla04515
]
139364650
04090 CD molecules [BR:
ocla04090
]
139364650
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139364650
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139364650
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin beta subunits
139364650
CD molecules [BR:
ocla04090
]
Proteins
139364650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
139364650
NCBI-ProteinID:
XP_070957680
LinkDB
All DBs
Position
13:complement(38285174..38307253)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGGLEFPFSTLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGHCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPDEPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGHLFEEKSCAGIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacgtctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggggctagag
ttccccttcagtaccctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacattgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcatttttgctgtgaccaacaatgtgatg
cccctctaccagaactacagccagctgattcctggcaccacagttggaacactgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccgggcttaagatcggagacacagtg
tcgttcagtgtggaggcaaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgcagccccaaacctgatgaacccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgaatgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggattctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccatctctttgaggagaaaagctgtgccggaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagtgga
aagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga
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integrated database retrieval system
