Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364676
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Entry
139364676 CDS
T10872
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Cadherin related
139364676
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139364676
NCBI-ProteinID:
XP_070957718
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Position
2:23885063..24004684
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AA seq
2903 aa
AA seq
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MTGATNGTVALKTFLLVALVSFSTGNSKLPVYYGQIVENSPAGTVVDGVALPVGNNCHVS
ELDIALEGKDASDFRLVYHHGEQHLILKSTETLDREFIAVYDLKVVLSGCLNSAVVIKIE
VLDSNDNIPRFIEGNERVKVDELTPIGSELVRLFAKDSDGGMNGRVTYYASPKCQHVYVV
PQTGQVMLVSSLIGVMNLTVRIYAQDNGDVALISKPVTLHLDVQRPAVSKVRRPRAVSEE
LSYTVTVSEDVKVGDMIFTVPDQKFEKKWFEVISEADSPVQIERDSGRLYLAHRLKSPAE
VMVKIQNLRGDEWYLCRLTLSVPTLADLQWGMFPQPYLGAVGPDAAPGSVVYRLTARQRD
GTIGNAHFLLLDGGEDSFEVDRSSGEVRTTGRPLTPSREYMLKVQVVDTQGRKGPPATVA
ILAGFRPPQFTNASYTLTVPENTPVGQAVAMVGAVSFQRKTLSYMLLVNPGNLFSVNQES
GALSLTRTVDFESGHTLHTLQVRASEPDTGLSGVAEVVVHIADENDCTPEFLHSIYSRDN
IPEATAPGTSLLQVLARDCDTGLNSELSYFIQSPDFAISSRGVVSPSQRLDYERPNHMYE
FVVVAVDNGTPPRTGTASIRFRMANTNDEAPIFSQAVYKTFLSEDAGPDTLVAIVHANDP
DGDGVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPILRGPQYILNITATDDNAADGPYPL
SNSAQVIVGINDINNNKPVFEECHNYSVNTGVLENQPPGTFVLRVHALDADMGVNGEVKY
GIMHRDGTSSGFVINPDTGVISTTVSFDRERQREYSLSVTATDLAQEPLIGICQITILIA
DQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAIAYSLSRQQPAYLHINP
STGWVYVNHPISQTSRISQQIVATDGGNRSSSVELTVIITNVHNQPPQWGQLEYWVTVPE
NTVRDAKIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRADGSASILVAEPLD
YETTRFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAEIGTSV
AQVSATDLDSGLHGMINYVILKDESGDSQYFSINSYTGVIHTRASFDREQKGSYLIEVQS
QDSSESARPGQQGQPNTDTAYVRILVTDVNDNAPAFAQSVYEVSVEEDKEVGFVLITVTA
NDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQHLDYEMEQRYELRLVASDGKWEN
ESLVVVHVVNRNDEAPVFGQTEYHAAVTEELTELPVFVLEVSATDPDQEADQSALRYSLH
GQGAGSEFTIDESTGRIYAQRRLDREERPAWRFLVLATDEGGAGLTGFADVLLEVHDIND
NAPVFPCPAPDSSGCFVGHVPENSPADTSVMEIRATDLDDPKAGKNAILTYRIVQNVRNE
INLNLFSINPSTGTISTVLRSLDREAEDRYLVVVEARDGGGLSGTGTATIMVSDVNDHPP
VFTQRVYNAQVAEDLEVNSEVLAVSASDGDQGENAVVTFSIVGGDEDRKFFVETDKANRR
GVVRLKKKMDFEKPHERTFNLTVKAEDADFFSLAYCLVQVEDSNDHAPVFFPQFYEAPAM
SEDVSVGTIVAQVTAADLDSGLNGRFSYSIAKESDPNGQFLVDQSGWVVVADSLDREMVS
QHRLMVLATDTGSPPLTGTAIVMVTVLDVNDNGPEFEVPYKPIVWENMAAPQAVRINDTS
LLLHAADRDSSPNGGPFSICLLMLTSDATSFNLTDLRNGSAALSTLRTFDREHQKEYRLP
ILMIDSGSPPMSSTSTLTVVIGDRNDHPHSPGHTNFFVYSYHGVLPTTVLGQVQSPDLDD
WSEKVYRFQGKPPSGLFSLNHNSGQLIIREGAPVPVGSYSLEVRVSDKTWPDVTSTAEVV
VMELDEEAVQNAGSLRLSNITVEQFFSSAPGQESSFSRLGRLLSELLQTNRDNVHIFSVA
NGNRQGEREVNVWFAAHGSPYYKAEKLHGNVMAHKAKLEAALGVSISQVGIDECPYTDCS
QSGGCSSDVTFSLTPTALSSGNTSLVSVSASSEARCGCRARESLHQACSSYPRNPCLNGG
TCQDSELGYRCKCPLMFDGPECQQTKHSFRGQGYAWFPPIRPCFQSHISLEFITESANGL
LLYNGPLGPAQVGEQEDYIALELRNGVPTLSISHGSGTLTLQLPARSTVTDRRWHRLDIV
SDGKAVQLILDQCSGAVVNEVEGLVVEVLETDQSGCKASGETPGNLRFLNVNQPLQLGGV
KETSTHRRYKAFTGCLRNLEVDSKVYDLGIPGESLDSSPGCGLTDGVCVTASGPSCGVHG
TCLGEWGSFSCDCHPGYSGHKCDKALPEWSFARDSMLRYQLRGGGSPRRTHIQLLLRTRS
SSGTLLSMTSHGANEYIILEIVDSHLSVRANLGDGAHSLRLASQRVDGGQWVLASLHRHD
NLFTLRLEQGGGSREARAWMGNRREIVVHPSSVLLGNGPTPGQSADFQGCLRDVRLNDHS
LLLDGQSTEFSTVLERRGVTSGCHSDACSAKPCRSPLYCVDLWRKHQCRCPGGQVTVTDE
TSGHHRCVPSPCGPSACRNRGTCHALTPDSWQCRCPEGFRGQRCEVGQMKAHRMAALSPG
SILVISMCLLVFFAVLVAVTVWNQKGSRSKFQKRGVYHLPAEHQSWEDIRENILNYNEEG
GGEQDQNAYDITELKRPLCSSLSQSSSCTTAPLIKSSQGSQEEVHPAGSACSSGTPYLHI
PHHHHRHHHHASNASYTNDSNDAHAISVGHCPMDFKSYVARIIWEADNDSQEFPPDSYHV
WSIEGAGSPVGSLSSLGSAISHDKAEEEEGAAFSSDRLSHWGDKFEALSEMYERPALALT
YRDALCYSQSQKSHSQDNLPHPF
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagctacaaacggaaccgtagccctgaagacatttttgcttgtcgcattggtt
tcattttcaacagggaattcaaagctgcctgtgtattatggacaaattgtggagaactcg
cccgctggaacagtggtggatggggtcgctttaccggttggaaacaactgtcatgtttcg
gaactggacattgctttggaagggaaggacgcatcagattttcgtttggtttaccatcac
ggagaacagcatcttattttgaaatccacagaaactttggacagagagtttattgcagtg
tacgatttgaaggttgtgctttctggttgtttgaatagtgccgtggtgattaaaatagag
gtgcttgattcaaacgacaacataccccggttcatcgagggaaacgaaagggtaaaagtt
gatgaattgacccctatcggttccgaattggtccgtctttttgcaaaggattccgacggt
ggaatgaatggccgggtcacttattacgcatctccaaaatgccaacatgtgtacgttgtt
ccccaaaccggacaggtaatgctggtcagttctctcattggtgtcatgaacctaacagtc
cgtatttacgctcaagataatggagatgtcgcattgataagtaagccggtgacacttcac
cttgatgtgcagagacctgctgtctcgaaggttaggaggccccgagcggtctccgaggaa
ctgtcctacacagtgaccgtctcagaggatgtcaaagtcggtgacatgatattcacggtg
cccgaccagaagtttgagaaaaagtggttcgaggtaatatcagaggcggactccccggtt
cagatcgagagggactcgggtcgtctgtatctcgcccacagactgaagtcccccgcagag
gtcatggtcaaaatccaaaacctcagaggtgatgagtggtacctctgcaggctgaccctt
agtgtgcccaccctggcagacctgcagtggggcatgttcccccagccctacctgggcgca
gtgggacctgacgccgcaccaggctctgtggtctaccgcctcaccgcccgccaacgagat
ggcacaataggaaacgcccacttcctgctactggacggcggcgaggattcgtttgaagtg
gaccgcagctctggggaggtcaggaccacaggccgacccctgacccccagcagggagtac
atgctgaaggtgcaggtggtcgacacgcagggcaggaagggtccccctgcaacagtggct
attctggcagggttccgccccccacagttcaccaatgcctcttacaccctgactgtccca
gagaacacgcccgtgggccaagctgtggcgatggtgggggccgtctccttccagaggaag
actctctcctacatgctgctggtgaaccctggcaacctgttcagtgtcaaccaggagagt
ggagctctcagcctcacccggacagtggactttgagagtggacacacactccacacgctg
caagtcagggcctccgagccagacacaggcctcagcggtgtggcagaggtagtggttcac
atcgcagatgagaatgactgcaccccagaattcctccactccatttacagccgggataac
attcccgaagccaccgcgcctggaacatcactgctacaagttctagcgagggactgtgac
acagggctcaactcagagctctcctacttcatccagagtcccgactttgccatctcttcc
aggggtgtggtcagccccagccaacggttggactacgagcggcccaatcacatgtacgag
tttgtggtggttgccgtggacaacgggactccaccccgcaccgggaccgcctccatccgg
ttcagaatggccaataccaacgacgaggctcctatcttctctcaagctgtctataagacg
ttcttgtcggaggacgctggtcctgacactctggtggccattgtccacgccaatgaccct
gatggagacggggtctcttacgccatcactggcggcaacgaggacagtaactttcagctg
gacaaccagaagggcatcatcaaactgcggcggagcccccctcctatcctgcgtggcccc
cagtacatcctcaacattaccgccactgatgacaacgcggcagacggaccctatcccctc
agtaactctgcccaggtcatagtgggcatcaacgacatcaacaacaacaagcctgtcttt
gaagagtgccataactacagtgtcaacaccggtgtcctggagaaccagccccctgggaca
tttgtcctccgcgttcacgccctcgacgcagacatgggggtcaacggagaggtcaaatac
gggatcatgcaccgagacgggacatcatccggcttcgtcatcaaccctgacacaggtgtg
attagcaccacagtgagtttcgaccgcgagcgccagagagagtactccctgtctgtcacg
gcgacagacctggcccaggagcccctcatcggcatctgccagatcaccatcctcatcgcc
gaccagaacgacaacgaccccaagtttgagaacagccgctaccagtacttcctgcgcgag
gacacgccggtggggactagcttcctgcgagcagcggcacacgatgatgaccaggggagt
aacgccgctatcgcctactctctgtcccgtcagcagccggcctacctgcacatcaacccc
agcacaggctgggtgtacgtcaaccaccccatctcacagacgtcgaggatcagccagcag
atcgtggccacagacgggggcaacaggagcagctctgtggagctgaccgtcatcatcacc
aacgtacacaaccagccgccccagtgggggcagctagagtactgggtcaccgtgcccgag
aacacagttcgcgacgccaagatagtgacgatcaaggccacttcaccgctgggtgaccct
agagtgacctataaccttgaggagggtcaggtccccgagaccaacatgcctgtccgcttc
tacatcaaacccaacagggctgatggctctgcatccatactggtggctgaacctctggac
tatgagaccacgcgcttcttcacactaagggtcagagtgcagaacgtagctgctgttcca
ctggcctcttttactactgtctacgtcaatgttacagatgtaaacgacaacgttcccttc
ttcctgtcctccacctacgaggctaccgttccagagggggcagaaatcggaacatcggtg
gcccaggtttctgctacggacctcgactcaggcctccatggaatgataaactatgtgatc
ttgaaggatgagagtggagactctcagtacttcagtattaactcctacactggggtcata
cacacccgggcctcgtttgaccgtgagcagaaaggttcctacctcatagaggtccagtct
caggacagctctgagtcagccaggcctggacagcagggccagcccaacactgacacggcc
tacgtacggatccttgtgacggacgtcaacgacaacgctccggctttcgcccaatcggtg
tacgaggtgagcgtggaggaagacaaagaggtgggcttcgtcctcatcaccgtgacggcc
aatgatgaagatgaaggtgccaatgccaagctccgctaccagatcacctctggcaacacc
atgggcacctttgacgtggagccagaggtgggcaccatctttgtggcccagcatttagac
tacgagatggagcaacgctacgagctgagactggtggcctccgacgggaaatgggagaat
gagagcctagtggtggtccatgtggtgaaccgcaacgatgaggcgcccgtcttcggccag
acagagtaccacgccgctgtcacagaggagctgactgagctgcccgtcttcgtgctggag
gtttcagccaccgacccagaccaggaggcagaccagagcgccctgcgctactcactccac
ggccagggagccggcagtgagttcaccatcgatgagagtacgggccgcatctacgcccaa
cgccgtctggaccgtgaggagcgcccggcctggcgtttcctggttctggccaccgatgag
ggaggggcgggactcactggctttgctgacgtccttttggaagttcatgacatcaacgac
aacgcaccagtcttcccatgcccggcgccggactcttcaggctgctttgttggccacgtg
cctgagaactctcccgccgacacctcagtgatggagataagggccacggatttagatgac
cccaaggccgggaagaacgccatactgacctaccgcatcgtacaaaacgttcgcaacgag
atcaacctcaatctgttctccatcaacccttcaactggaaccatcagcacagttctacgg
tctctggaccgtgaggcggaggaccgctatctggttgtggttgaggccagggatggtggg
ggcttgtctgggactggaacggctactatcatggtatcagatgtcaatgaccatccacca
gtcttcacccagagggtctacaatgcccaggtggcggaggacctagaggtgaacagcgag
gttctggcggtttccgccagcgatggcgaccagggtgagaacgcagtggtcactttcagc
atcgtcggaggcgacgaggacaggaagttctttgtggagacggacaaggcgaaccggcgt
ggtgtggtgcggctgaagaagaagatggactttgaaaagccccacgagagaacgttcaac
ttgactgtgaaggcggaagacgcagacttcttcagcctggcatactgcctggttcaggtg
gaggattccaacgaccacgcacccgtcttcttcccacagttctatgaggctcctgccatg
tctgaggacgtgtctgttggcaccattgtggctcaagttaccgctgccgatctggactca
ggactaaatggccgcttctcctacagcattgccaaagagtctgaccccaacgggcagttc
ctggtggaccagtcaggctgggtggtagtggctgactctctggaccgggaaatggtatcc
cagcacagactcatggtcctggccaccgacacgggcagcccgccactcaccggcaccgcc
atcgttatggttaccgtactggacgtcaatgacaacgggccagagtttgaggtgccctac
aagcccattgtgtgggaaaacatggctgccccccaggcggtgagaataaacgatacatcc
ctgcttctccatgcagccgaccgcgactcctcacccaatggtggaccgttttccatctgt
ctcctgatgttaacctccgatgctaccagcttcaacctgactgacctgcgcaacggtagc
gctgcactgagtaccctgcgaacctttgaccgtgaacaccagaaggagtaccgccttccc
attctcatgattgacagcgggtctcccccaatgagctcaaccagcacattgacggttgtc
atcggcgacaggaatgaccacccccactctccgggccacaccaacttcttcgtgtacagc
taccatggtgttctccccacaacagtgcttggacaggttcaatctcctgaccttgacgac
tggagcgaaaaggtttacagattccaaggcaaaccccccagcgggttgttcagtctgaac
cacaactcaggccagttgattatcagagagggggcccctgtaccggtgggttcctacagc
ctcgaggtgcgtgtctccgacaagacctggcccgacgtgacctccactgcggaggtcgtt
gtcatggagctggatgaggaggcggtccagaacgctggctctttgcgcctgtccaacatc
acagtggaacagttcttcagtagtgcaccgggtcaggagagttctttctcccgcctgggt
cgtctcctctccgagcttctccagaccaaccgggacaacgtccacatcttctctgtcgcc
aatggcaaccgccagggtgagcgcgaggtcaacgtgtggttcgccgcccacggttcgccg
tactacaaggccgagaaactccacggcaatgtgatggcacataaagctaagttggaagca
gcactgggtgtgtctatctcccaggtgggtatagacgagtgtccctacacagactgcagt
cagtcgggcggctgcagcagcgacgtcaccttcagcctcacccccaccgccctcagctcc
ggaaacacctccctggtgtctgtctccgcctcctctgaggcacgctgcggctgcagggcc
agagagagcctgcaccaggcctgctcctcttacccccgcaacccctgcctcaacggaggc
acctgtcaggacagcgagctgggatacaggtgcaagtgtccactcatgtttgacgggcct
gagtgtcagcagaccaagcactccttccgcggccagggttatgcctggttccctcccatc
aggccttgctttcaaagccacatctcattggagttcataaccgagtcagccaatgggctg
ctgctctacaacggccctctaggccccgcccaggtcggagagcaggaggactacattgct
ctggaattgaggaatggcgttccgaccctcagcatcagccatggatcgggaacactgacg
ttgcagctcccagcgagatccacagtcacggaccgccgatggcaccgcctggacatcgtc
agtgacggaaaggcagttcaactgatcctagaccagtgttcgggggcagtggtgaatgag
gtggagggtctagtggtggaggtgctggagacagatcagtctggctgcaaggcttctgga
gagacccctggcaacctgaggttcctgaatgtgaaccagcctctccagctgggtggggtg
aaggagacctccacacacagacgctacaaagctttcactggctgcctcaggaacctggag
gtcgatagcaaggtatatgacctgggaattccgggggagagcttggatagttccccaggc
tgtggcctgacagacggggtgtgtgtgacagcaagtggaccctcctgtggcgtccacggg
acctgcctgggcgagtggggctccttcagctgtgactgtcaccccgggtacagcgggcac
aagtgtgacaaagctctaccagagtggtccttcgccagggacagtatgctacgctaccag
ctgagggggggaggtagcccccgtcgtacacacatccagctcctgctccgcacgcgctcc
tcctctggcaccctgctctccatgacgtcccacggtgccaacgagtacatcatcctggag
atcgtagacagccacctgtcggtgcgtgccaacctgggtgacggtgcccactcccttcgc
ctggccagccagcgggtcgacgggggccagtgggtcctcgccagcttgcatcgtcatgac
aacctcttcacgctgcgcctggagcagggcggtggctcgcgggaggccagggcctggatg
gggaacaggcgggagattgtggtgcacccctccagtgtgctgctggggaatggacccacc
ccgggacaatctgctgacttccagggctgcctgcgggatgtgaggctgaacgaccactcc
ctccttctggatggtcagagtaccgagttcagcacggtgttggagcggaggggggtgact
tcaggttgtcactcagacgcctgcagtgccaagccctgccgcagccccctctactgtgtg
gacctgtggaggaaacaccagtgcaggtgtccaggtggccaggtgacggtgacagacgag
acatcaggccaccaccgctgtgtgccctccccctgtggaccctcggcctgccgtaacagg
ggcacctgccacgccctgacccctgacagctggcagtgccgttgccccgaggggttcaga
ggtcagcgttgtgaggtgggccagatgaaagcccaccgtatggccgccctcagcccgggc
tccatcctggtcatcagcatgtgtctgctcgtcttcttcgctgtgctggtagctgtgaca
gtgtggaaccagaagggcagtcgtagtaagttccagaagaggggcgtgtaccacctccct
gcagaacaccagagctgggaggacatcagagagaacatcctcaactacaacgaggaggga
ggaggagagcaggaccagaatgcctatgacatcacagagctgaagaggcccctgtgttcc
agcctgtcccagtcctcatcctgcaccaccgcccctctcatcaagtcctcccagggctcc
caggaggaggtgcaccccgctggctcagcctgcagctcagggaccccctacctccacatc
ccccaccaccaccaccgccatcatcaccacgctagcaatgctagctatactaatgatagt
aatgatgctcatgctatctccgtgggccactgccccatggacttcaagagctatgtggcg
cgcattatctgggaggccgacaacgacagtcaggagttcccgccggacagctatcacgtc
tggagcatcgagggcgccgggtctccggtcggtagcctcagctcgctgggttctgctatc
tcccacgataaagcagaggaagaggagggagcagccttcagctctgaccggctatcccac
tggggggacaagtttgaggctctaagtgaaatgtacgagcggccggcgctggcgctgaca
tacagggacgctttgtgttacagccagagtcagaaaagccatagtcaggacaacctgcca
caccctttttag
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integrated database retrieval system
