Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364722
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Entry
139364722 CDS
T10872
Name
(RefSeq) Golgi SNAP receptor complex member 2-like
KO
K08496
golgi SNAP receptor complex member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139364722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139364722
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
139364722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
Ran-binding
DUF2046
DUF4371
V-SNARE
EzrA
GIT1_C
Mononeg_mRNAcap
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
139364722
NCBI-ProteinID:
XP_070957823
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All DBs
Position
13:40252992..40264624
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AA seq
212 aa
AA seq
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METLYHQTNKQIQEVQSLMGRLENTDRQSVHLLENDLQARIDQIFSHFERLEILAGKEPP
NRRQNVKLRVDQLKYDVQHLQTALRNFQHRRYSRETQDREREELMSRTFTTNDADTSIPI
DETLQLNSNLNNAHRGMDDLLGSGSSILTGLRDQRDTLKGTHKKMLDVANMLGLSNTVMR
LIEKRATQDKFIMIGGMLLTCVVMFLVVKYLG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagacattgtaccatcaaacaaataagcaaatccaggaggtgcagtcgctcatggga
cgcctggagaacacagatcgtcagtctgtccacttgttggagaacgatctgcaggccaga
atcgaccagatcttcagccatttcgaacgtctggaaatcctggctggcaaagaaccgcca
aaccgccgtcagaacgtcaaactgcgggtagaccagctgaagtatgatgttcagcacctc
cagacggcgctgaggaacttccagcaccgtcgctactcacgagaaacccaggaccgagag
agggaggagctcatgagtcgtaccttcaccaccaacgatgcagacacctccatccccata
gacgagacgttgcagttaaactccaacctgaacaacgcacacagaggcatggacgacctc
ctgggcagcggcagcagcatcctcacaggactccgggaccagagggacacactcaagggg
acccacaagaagatgctggatgtggccaacatgctgggtctgtccaacacggtgatgagg
ctgatcgagaagagggccacccaggataagttcatcatgattggagggatgctgctcacc
tgtgtggtcatgttcctggtggtcaagtacctgggctga
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