Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364740
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Entry
139364740 CDS
T10872
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139364740
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Ferlins
139364740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
139364740
NCBI-ProteinID:
XP_070957862
LinkDB
All DBs
Position
13:41882913..41943422
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AA seq
2052 aa
AA seq
DB search
MLRVVVESAKGIPKKKLGHPDPIAAVVFKGEKKKTKAIDSELNPVWNEVLEFDLKGSPLD
ASSFLDVIVKDYETIGKDKFIGSAKISLLDLAHGHTKSLPAKNLSLVNEKKQDTGATINL
MIGYEPPASTTPNPNNQTDEDQSHGDTGEGEEGEDREEVSLGGQAGTPGVPPTPGQPGNP
NQRPVRTSRKRHRALANKPQDFQIRVRVIEGRQLPGNNIKPVVKVNVCGQTHRTRIRRGN
NPFFDEMFFFNVNMLPSELLDDYISIRVYDSYSLRADSLMGEFKLDVGYIYDEPAHAIMR
KWLLLSDPDDSSSGAKGYLKVSLVIVGTGDEPPTEKRERNEEQDDIESNLLVPAGVTLRL
VTLNLKVYRAEDMPQMDDAFVQTVKQVFGGEGDKKNLVDPFLEVSFAGKKLCTKIIEKNA
NPEWNQLINLQVKFPSMCESIKLTVFDWDRLTRNDVIGTTFLNLTKIASSGGEIEDTPAE
NCTNLSSEVSSGEAEVGFLPAFGPCYLNLYGSPREFTGLPDPYEELNFGKGEGVAYRGRV
LIELSTQLEGKADRKLDNISSDDILVAQKYQRRRKFSLCAVFHSSCMLQEPGEPIQFEVS
IGNYGNKLDSTCMPLASTTQYSCAVFDGNHYYYLPWADTKPVVILTSFWEDISHRLDSVN
IILYIADRLESNLTSLRTAILAKASEVRLAEIWLKLINHMIEDLSNFQVPELEGRPNLTA
LDVQIKKLRDSAVAIIREMAKRLKEEATDVIATLTDIEDWLERLKQLAEEPQNSMPDVVI
WMLRGERRVAYARLPANQILYSTYSEQACGKYCGRTQTIFMQYPMDKNKGVKIPVQLRVN
MWLGLSAHEKKFNSFSEGTFSVFAEMYENQAQVFGKWGTTGLVCRHKFSDVTGKVKLKQE
RFMPPRAWEWEGEWFVDPERGLLTEADAGHTEFTDEVFQNETRFIGGEWKPAADPFTDVN
GQKSQSPGEIECPAGWKWEDDWSFDSNRAVDEKGWEYGVTIPPDDKPKSWGAAEKMYHIH
RRKRLLRPRRKIADTKAAPERRDPGEGWEYSSLIGWKFHRKERSSDTFRRRRWRRKMAPS
DGIGASAIFRLEGALGVDVDEKASKKDAARLFGANTPTVSCNFDRSYMYHLRVYVYQARN
LIAMDRDSFSDPYAHVSFLHVSKTTEVIRATLNPTWDQTLIFNDIEIYGDPQTIALNPPN
VVLELYDSDQVGKDEAMGRCTCPPVVKLNLGTVVSPKLLWFPVTKKGRSAGEMLVAAELL
LKDKANESDLPLVPPRRGATLYMVPQGIRPVVQLTAIEILAWGLRNMKTYQLATVTSPSL
MVECGGEVVQTAVIKNIKKNPNFPGSVLFFKVLLPKEEIYTPPIVLKVIDHRPFGRKPIV
GQCTLSLEEFRCDPYVTNAEVAMSSKVAMMAATQGDIIINMEDRPILNTELHKEKEEEAV
DWWSKFYASVGEHEKCGPYLKKGYDTLKVYEGELEEVPDFRGLTDFCKTFRLQRGKTEDE
DDDPSVVGEFKGSFRVYPLSDDPGVPAPPRQFRELPESGLQECLVRIYVVRCMDLQPKDN
NGMCDPYIKISLGKKTKDDRDDYTPNTLNPEFGRMFELSCFLPQDKDLKIAVYDYDLLSR
DEKVGETVIDLENRLLSRFGAYCGLPQSYCISGTNQWRDQLKPSQILENLARLRGIPSPR
TSADGSTLSFGGKDYSLLDFEANRVIHQHLGPARERMALHVLSKQGLVPEHVETRTLYST
YQPTLSQGKIQMWVDIFPKSLGLLGPPCHITPRQAKKYFMRAIVWNTTDVILDETSITGE
NMSDIYVKGWMPGMEQDKQKTDVHYRSLDGDGNFNWRFVFGFDYLPAEQLCLVSRKEHFW
NLDQTEFRTPPKLIVQIWDNDKFSLDDYLGTVELDLLHLIPPAKTPEKCSLKMLPGVTGS
TPSKQPPPNSLFSQKSVRGWWPCMIEQDGKHILGGKVEMTLEIVEEREVEERPAGKGRDE
PNMNPKLDFPNRPDTSFFWFTSPCKTMRFIIWRRFKWIFIGLIVLLLVLLFLGILLYSLP
NYISMKIVKPFS
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtcgtagtggaatcagccaaaggcatccccaaaaagaaactcggacaccca
gatcccatagcagcggtagtgttcaaaggtgaaaagaagaaaactaaggccattgatagt
gaactcaatcccgtgtggaatgaagtgcttgagttcgacctaaagggctccccattggat
gcctcctcctttttggacgtgattgtgaaagactatgagactattggcaaagacaaattt
attggctcagctaagatctctctcctagacctggctcatggtcacaccaagtccctccca
gcaaagaacctgtccctggtcaatgagaagaaacaggacactggggcgaccattaacttg
atgatagggtacgagccgccagctagcacaactccgaaccctaacaatcaaactgatgaa
gaccagtcgcatggggacacaggtgagggtgaggaaggggaggatagggaggaggtatcc
cttgggggtcaggcggggacccctggagttccacccacacctggccagcctggtaacccc
aaccagaggcctgtccggactagccgcaagagacaccgggccctggccaacaagccccag
gacttccagattcgcgttcgagttatcgagggccgacagttgccgggaaacaacatcaaa
ccggttgtcaaagtgaatgtgtgcggacagacccacagaaccaggatcaggcgaggaaac
aaccccttctttgatgagatgttcttcttcaatgtcaacatgctgccttctgagctttta
gatgactatatcagtattcgggtctatgattcctactccctcagagcagacagtctaatg
ggggagttcaagttggatgttgggtacatatatgacgaacctgcccacgccataatgagg
aagtggcttctcctgagtgaccctgatgactctagctcgggggccaaaggttacctgaag
gtcagcctggtcatcgtggggacaggagacgagccaccgactgagaagagagagcggaac
gaggagcaagatgacatagagagtaatctgttggtgcctgctggggtaacactcagattg
gtcactctcaacctgaaggtgtaccgtgctgaggacatgcctcagatggatgatgcgttt
gtacagactgtgaaacaagtatttggaggggaaggcgataagaaaaacttagttgatcca
tttctggaggtcagcttcgctggcaagaagttgtgcaccaaaattatcgagaaaaatgcc
aatcctgagtggaaccagctgatcaaccttcaggtcaagttcccgtccatgtgtgaaagc
atcaagttgactgtatttgactgggatcgtctgaccaggaatgatgtgataggaaccaca
tttctaaacctgaccaaaatagcctcatctggtggtgagattgaagatacgcctgcagaa
aattgcaccaatctgtcatctgaagtgagcagtggggaggcggaggtgggtttcctccca
gcgtttgggccttgctacctaaacctgtacggcagtcccagggagttcactggcctccca
gacccgtacgaggaactcaactttggcaagggtgaaggggtggcctacaggggcagagtc
ctcatcgagctctccactcagctggagggcaaagctgacaggaagctggacaacatctcc
agtgatgacatcctggtggcccagaagtaccagcggagaaggaagttctcgctgtgtgct
gtgttccacagctcctgcatgctccaggagcccggtgagccaatccagttcgaggtcagc
atcggtaactacggcaacaagctggactccacctgcatgccgctggcatccacaacccaa
tacagctgtgctgtgtttgacggtaaccactactattacctgccctgggctgacaccaaa
cctgttgtcatcctcacatccttctgggaagacattagccaccgattggattcagtcaac
atcatcctctacatcgcagacagactggaatccaacctcacttctttgagaacagccatc
cttgccaaagcctcagaggtgcgcttggctgagatctggctcaaactcatcaaccacatg
attgaggatctgagcaactttcaggtaccagagcttgagggcaggcccaacctgacggcg
ctggacgtccagattaagaagctgcgtgattcggctgtggccatcatcagagagatggcc
aaacgcttgaaggaggaggccaccgacgttatagccactctgacagacatcgaggactgg
ctggagagactgaaacagcttgcagaggagccccagaacagtatgcctgacgtggtgatc
tggatgctgcgtggagagaggagggtggcgtacgcccgtctcccagccaatcagatcctc
tactccacctacagtgagcaggcctgtgggaaatactgtggcaggacccagaccatcttc
atgcagtaccccatggacaaaaacaaaggtgtgaagatccctgtccagctccgtgtcaac
atgtggctggggctctctgcccacgagaagaagttcaacagcttctcagagggaaccttc
agtgtgttcgcagaaatgtatgagaaccaggcccaggtgtttgggaagtggggcaccaca
gggttggtgtgccgtcataagttctctgacgtgacggggaaggtgaagctgaaacaggag
cgcttcatgccccccagggcgtgggagtgggaaggcgagtggttcgtcgaccccgagaga
ggcctgctaacggaagcagacgcggggcacacagagttcacagacgaggtcttccagaac
gagacgcgtttcattggcggggagtggaagcctgctgccgaccccttcacagacgtgaat
gggcagaagagccagagtccaggggagatagagtgtcctgctggctggaagtgggaggat
gactggagcttcgacagcaacagggctgtggatgagaaaggatgggagtatggcgtcacc
attccccccgatgacaagcccaagtcctggggagcagcagagaagatgtaccacatccac
cgcaggaagagactcttacggccacgcaggaaaatagcagacactaaagcagcacccgag
aggcgggatcccggcgaaggctgggaatactcgtccttgattggctggaagttccacagg
aaggagcgttcgtctgacacattccgccgtcgccgctggagacgcaagatggctccgtca
gatgggataggagcgtcagccatcttcaggctggagggggcgctgggggtagatgttgat
gagaaggccagtaagaaggacgcagccagactgtttggtgccaacacacccaccgtttcc
tgtaactttgaccggtcgtatatgtaccatctgagggtgtatgtctatcaggccaggaat
ctcatcgccatggacagggacagcttctcagatccctatgcccatgtgtccttcctccat
gtgagtaagaccacggaggtcatcagggccactctaaaccccacctgggaccagaccctc
atctttaatgacatcgagatctatggagacccccagaccattgcactcaacccccccaac
gtggtgctggagctctacgacagtgaccaggtgggtaaagacgaggccatgggtcgctgt
acgtgcccccctgtggtgaagctgaacctcggcacggtggtctcccccaaactgctgtgg
ttccccgtcaccaagaaaggccgcagcgcaggagagatgctggtggctgctgagctattg
ctgaaagacaaggccaatgagagtgacttgcccctggtgccccccagacgaggagcaaca
ctctacatggttccccaaggaatcaggcctgtcgtacagcttaccgccatcgagatctta
gcctggggtctgaggaacatgaagacctaccagttggccacagtcacctctcccagtctc
atggtggagtgtgggggggaggtcgtccagacggccgtcatcaagaacatcaagaagaac
cccaacttccccggatctgtcctcttctttaaagtgctcctacccaaagaggagatatac
acccctcccatcgttctgaaggtgatcgaccaccggcccttcggtaggaagcccattgtg
ggccagtgtaccctctccctggaggagttccgctgtgacccttacgtcaccaatgctgag
gtggccatgtcttccaaagtggccatgatggcagcaacacaaggagacatcatcattaac
atggaggataggcccatccttaatactgagctccacaaagagaaggaggaggaggcagtt
gactggtggagtaagttctatgcctctgtgggagagcacgagaagtgtgggccgtacctc
aaaaaaggatacgacaccctaaaggtgtatgaaggggagctggaggaggtcccagatttc
cgagggctgacagatttctgtaaaacgttccgactgcagcgggggaagactgaggatgag
gacgacgacccctcagtggtcggagagttcaagggctcgttccgggtgtaccccctatct
gatgacccaggggtgccagccccaccacgccagttcagagagctgcctgagagtgggttg
caggagtgcctggtcaggatctacgtggtgcgatgcatggacctgcagcctaaagacaac
aacggcatgtgtgacccttacatcaagatctctttggggaagaaaacaaaagatgacagg
gatgactacacaccaaacaccctcaatccagagtttggcaggatgtttgagctgtcctgt
ttcctccctcaagacaaagacctgaagatagccgtgtacgactatgacttgctcagccga
gatgagaaagtcggagagacggtcattgacctggagaacagactcctctcccgcttcggc
gcctactgcggcctgccgcagtcctactgcatctcagggaccaaccagtggagggatcag
ctgaaaccttcccagatcctggagaacctggccagactgagagggatcccttcaccccgc
acctctgctgacggcagcacgctctccttcggggggaaagactacagcctgctggacttt
gaggccaacagagtcatccaccagcacctgggtccagccagggagaggatggccctgcat
gtcctcagtaaacagggtctggtgccagagcatgtggaaaccaggactctctacagtact
taccaacctacactgtcccagggaaagattcagatgtgggtggacatcttccccaagagc
ctgggtttactgggacctccctgccacattactccacgccaagccaagaagtacttcatg
cgggctatcgtctggaacaccactgatgtcatactagatgagaccagcatcaccggagag
aatatgagtgacatttacgtcaaaggatggatgcctggtatggaacaggacaagcagaag
acagacgtccattacagatccctggatggtgacggcaacttcaattggcgattcgtcttt
ggctttgactacctgcctgcagagcaactgtgtctcgtttccaggaaagagcatttctgg
aatctggaccaaaccgagtttcggacccccccaaagttgatcgtccagatttgggacaat
gacaaattctcactggatgactacctgggcacagttgagctggatctgcttcatctgatc
ccccctgccaagacccctgagaaatgcagtctgaaaatgttaccaggggttacaggctcc
acaccttccaaacaaccaccgcccaactctctgttctcccagaagtctgtgcggggctgg
tggccctgtatgatcgagcaggacgggaaacacatcctgggtgggaaagtggagatgacc
ctggaaatagtggaagagagggaggtagaagagaggcctgctgggaagggccgggacgaa
cccaacatgaaccccaaactggactttcccaatcgccccgacacttccttcttctggttc
accagtccatgcaagaccatgaggttcatcatatggcgcagattcaaatggatcttcatt
ggtttgatagtcctcctgcttgtgctcttgttccttgggatcctgttgtactccctacca
aactacatctcaatgaaaattgtgaagcctttctcttag
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