Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364794
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Entry
139364794 CDS
T10872
Name
(RefSeq) protein Tob2-like
KO
K14443
protein Tob/BTG
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139364794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139364794
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139364794
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139364794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
139364794
NCBI-ProteinID:
XP_070957993
LinkDB
All DBs
Position
13:complement(44409562..44416502)
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AA seq
404 aa
AA seq
DB search
MHLEVKVALNFIVSYLYNKLPRRRADLFGEELEQILLSHYEGHWYPEAPLRGSAFRCLHL
GAPSDPVVELAARRSGLDTEEVRANVPPELSVWIDPYEVSYQIGEKGAVKVLYLEDPSGL
VEGEMVEVVSGVSKGDMEVEEAKSLGFNPEAQVFVPIGAQISPVLLPSLSSTPTPLSASS
CPVIFSYPSSSTPTNPTAHSSNTSTPSPPSGGLPYPPSQQPTAALPSTRPPLQPITFTTA
SFAATKFGSTKMKKCGGSGSAGGSGVGVPPPQRMLARSPTSISPPGLLKHKPLSVSLHSL
GAQIPSQLSPNAKEFVYPASQGPLYFDNDAPLILSHSSPFQHPHPAHSHPSFDPFSNPQP
GPAVGAIGGSGGISYIEKPSFVEGIGGYNLQYPSQAFQPVVLAN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcacctagaggtaaaggtagctctgaatttcattgtgtcctacctgtacaacaaactg
ccccgtcgtcgtgctgacctcttcggggaggagttggagcagatactgttgtcgcactat
gaaggccactggtaccctgaagctcctttgcggggctctgccttccgctgcttgcaccta
ggggcccccagtgacccagtggtggagctagctgccaggagaagtggactggacacagag
gaagtgcgtgccaatgtcccccctgagctgagtgtgtggatcgacccctatgaagtgtcc
taccaaatcggggagaagggagccgttaaggtcctgtacttggaggatccatccggctta
gttgaaggcgaaatggtggaagtagtaagtggagtgagtaaaggggacatggaggtagag
gaggccaagagcttagggttcaaccctgaggcccaggtgtttgttccaattggagcccag
atatctccagttctgcttccttccctctccagcacacccacacccctctcggcctcatcc
tgcccagtgattttcagctatcccagctccagcacacccacgaacccaactgcccactcc
tctaacacatccacaccttcccctccaagtgggggactcccttaccccccctctcagcag
ccaacggctgccctgcccagcacccgtccaccgctgcagcccatcaccttcaccacggcc
agtttcgccgcaacaaaatttggctccaccaagatgaagaagtgtggcggttccggatcg
gctggcggctcgggtgtaggcgtgcccccaccacagaggatgctcgcccgttcccccacc
agcatctctcccccagggctgctgaaacacaagcccctctcagtctccctgcactccctg
ggggctcagatccccagccagctctcccccaatgccaaagagtttgtttacccggcatcc
caagggcccctatactttgacaacgatgctccgctcatactttcacactcaagccccttc
cagcaccctcaccccgcccactcccacccctcatttgacccattctccaacccccaacct
ggtccagctgttggtgccattggtggtagcggtgggatttcttacattgagaagccctca
tttgtggaaggaataggggggtataacctgcaatatcccagccaggccttccagccggtg
gtgctggccaactaa
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