Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364809
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Entry
139364809 CDS
T10872
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
139364809
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
139364809
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139364809
NCBI-ProteinID:
XP_070958011
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Position
13:43713378..43732184
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AA seq
647 aa
AA seq
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MTEFKRAFSLVWDHFTLVTPNKVQCALCSQRLSFNKNTSAMLRHLRSRHPSEAWYSNSTS
GAHSSTSNSTSGVHSTFSNSIISGSGVHSSFSGTTGLNSMFTNSAAAGHHIQVRTTRQED
LDDALVNMLVKDTQPFSVVEEEGFTAFVQKLDPSYNLPNKQALKKMVGSRCEFINDNVVS
QMVISDFVSLTLDMWTSIDKHSYISVTGHLVAENAQLSTFLLGISKLPENHKVIHIEEAK
NQLVASWGLHSRVAAFVTENSENMVATVQKLGILQLPSFAHVLNLVIKRSMEATLELQDI
RSQARAIVSFFKSNQNAEMRLAEVQGQLGRPEQKLIQEVDSRWNSSFSMLERVFDQRESV
AAALSTLDTDIIPLGSADYEVIHQCLGVLGSFNQATAELASEKRVSASKVIPLVRMLKIT
LEKKHGAIIHSTATQLASNLQRELQTSCSMVETEPILALSALLDPRFKMLAFGNQGYAQE
AVKLLTSECASLIRINPDKDDILPPSTTRSTTPSLTSPHTWAMETASISMATSPSKSHDG
GLWEMFDSKVGETQSVQSSTADAAVEVQHYLSDPYLNRVENPMHYWEKHSKVYPHLFQLA
RKYLSVPASSVPCERIFTKAGDVFNKKRSCLSMKAVEQIMLLNKGLV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatttaagagagccttctcactggtgtgggatcacttcactctagtgacaccc
aataaggtccagtgcgccctctgttcacaacgacttagcttcaacaaaaacacctccgcc
atgttaaggcacctacgatcaaggcacccaagcgaggcttggtacagcaactcaacatct
ggggcccactcaagcacaagcaactcaacatctggagtccactcaacgttctcaaactca
ataattagtggttctggagtccactcatcgttctctggtactacaggactaaactcaatg
tttacaaacagtgctgctgctggacaccacatccaagtcaggaccaccagacaagaggac
ctggatgatgccctagtcaacatgttggttaaagacacccagccattttcagtagtcgag
gaagaaggattcactgctttcgtccaaaagctagacccaagctacaatcttccaaacaag
caagcactgaagaaaatggtggggtctcggtgtgaattcatcaatgataatgttgtatct
cagatggtaatttctgactttgtcagcctgactttggacatgtggacatctatagacaag
cacagttacatttcagtgacggggcatttggtagcagaaaatgcccagttatccactttc
ctccttgggatttctaagctgcctgaaaaccacaaagtgatccacattgaggaggccaaa
aaccaactggtggcgagctggggcctccacagcagggtcgctgcatttgtcacagagaac
agcgaaaatatggtagccacggttcagaaactaggaatcctccagttgccctcttttgca
cacgtcctgaaccttgtgattaagaggtccatggaggctactttggagctgcaggacatc
cgctcccaagcgcgggctatcgtgtctttcttcaagtcgaatcagaacgcagagatgagg
ttagccgaggtgcaggggcagctaggcaggccggagcagaagctgatccaggaagtggac
tcgagatggaacagtagcttttctatgctggaacgcgtctttgatcagagggagtctgtg
gctgctgctctcagcaccctggacacggacatcatccctctgggatctgctgactacgag
gtcatccaccagtgtctcggagtgctgggttccttcaaccaggccacagccgagctcgcc
tcagagaaacgcgtctcggcttccaaggtcattcctcttgtccggatgctgaagataacc
cttgagaagaagcacggtgccatcatacactctacggctacacagctggcgtctaacctg
cagagggagcttcagacaagctgcagtatggtggagaccgagccaatcctggctctctcg
gctctcctagacccgcgcttcaaaatgttggccttcgggaaccaaggctacgctcaggag
gcggtgaagctcctcacctccgagtgcgcctcattaatccggataaatcccgacaaggat
gacattctaccgccctccaccaccaggtcgacgacgccctccctgacatcaccccacacc
tgggcaatggaaacagcttccatctccatggcaacatctccgtctaagtcccacgatggg
ggtctgtgggagatgtttgacagtaaagtgggtgagacacagagcgtccagagcagcacg
gcggacgcagcggtggaggtacaacactacctcagtgacccgtacctgaaccgagtggag
aaccccatgcactactgggagaagcactccaaggtgtacccgcacctgttccagctggct
cggaaatacctcagtgttcctgcctcgtctgtgccatgcgagcgcatattcaccaaagct
ggagatgtgttcaataaaaagaggagttgcctcagtatgaaggctgtagagcagataatg
ctgttgaataaaggtctcgtatag
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