Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364868
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Entry
139364868 CDS
T10872
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420
Nucleotide excision repair
ocla04141
Protein processing in endoplasmic reticulum
Brite
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139364868
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
139364868
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GFIT
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NCBI-GeneID:
139364868
NCBI-ProteinID:
XP_070958144
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Position
13:45522054..45531214
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AA seq
353 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEAPKAPVQDSGSSAGPAPAAIPIPPEEPTPTV
AEPPAPASSDPSMEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNPHR
AVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQVIQ
QNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEGAP
VNYIQVTPQEKEAIERLKVLGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttaaagacactgcaacagcagaccattcaaatcgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacaaaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgacgagaagaatttcgttgtagttatggtatcgaaggcaaagtctgcc
acagctgcatcaacaccttcctcagaggcacccaaggcccctgtccaagactctgggtcg
tctgcgggcccggcccctgcagccatccctatccccccagaggagcccacacctacagtc
gcagagcccccagctccagccagctccgaccccagtatggaggttcaggggggagatgcc
tcctctgccttggtgacaggagcggagtatgagaccatgctgacagagataatgtctatg
ggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccccatcgg
gctgtggagtacctcctcactggcattcctagcagtccggtccaagagactaatccccca
gcacagcttcctgcatctgcccgcacaggcacagagacccctactgtagctgagggagaa
aaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccag
cagaacccctcactgctgccagctctgctccaacagctgggccgggagaacccacagctc
ctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggg
gaggttggagacgtgcctgaggtgggggacctgggtgctgcagtggaggagggagctcca
gtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagtgttg
ggtttccccgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaaccta
gctgccaacttcctcctgaaccagggctttgaggatgaatga
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