KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364908
Entry
139364908         CDS       T10872                                 
Name
(RefSeq) transcription activator BRG1 isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082  ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     139364908
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     139364908
  Chromatin remodeling factors
   BAF complex
    139364908
   PBAF complex
    139364908
   GBAF(ncBAF) complex
    139364908
SSDB
Other DBs
NCBI-GeneID: 139364908
NCBI-ProteinID: XP_070958231
LinkDB
Position
13:46751000..46770495
AA seq 1632 aa
MSTPDPPMGGTPRPGPSPGPGPSPGAMMGPSPSPGSAHGMMGPSPGPPASGHSHPQQGPS
GYPQENMHQMHKPMEGMHEKGMSDDPRYGPMKSMGMRPGGGHIGMGPPPSPMDQHSQGYP
SPLGGSEHSPSPVPANGPPPGPMMPSGPGVPMEGGDPQAMGQQNRIGVPGPSGGSGPGGP
TPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQQPGMPNMPPSSGPG
AGPGQPPANYNRPHGMVGPNMPPPGPSGVPPGMQGQPTNGPPKQWPEGPMVNAAAPSSAP
QKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPPQPPPMVLHQKQNRITPIQKPRG
LDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKKPESGEGQPPA
LGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDTWLEMNPGYEVAPRSDSE
DSGSEEEEEEEVEPQPSQAPTEEKKKIPDPDTEDVSEVDARYIIEGAKQDVDDEYNSAEA
AFARGLQSYYAVAHAVTETVDKQSTLLVNGQLKHYQIKGLEWLVSLYNNNLNGILADEMG
LGKTIQTIGLITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPQARR
AFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTVVLNTHYL
APRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGEKVDLNEEETI
LIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS
EKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSGPDLYRAAGKF
ELLDRILPKLMVTDHKVLLFCQMTSTMTIMEDYFGWRNFKYLRLDGTTKAEDRGMLLKTF
NDPASKYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVL
RLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVGAP
GGWRAGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPKRKPRLMEDDE
LPTWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGNLEDLEE
EVRHKKTTRKRKRDRDDMPGPATPSSSGGGGGRSRDKDEEVKKAKKRGRPPAEKLSPNPP
SLTKKMKKVVDTVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRS
HKYRSLNDLEKDVMLLCSNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEKEEESEGED
SEEEEEEEVDEGSESESRSVKVKIKLGRKEKEGRGKGQRRRGRGSRAKPVVSDDDSEEEQ
EEAGSASGSEEN
NT seq 4899 nt   +upstreamnt  +downstreamnt
atgtccaccccagacccccccatgggagggacgcctcggccgggcccctccccaggaccg
gggccttctccaggagcaatgatgggccccagcccttccccgggctctgctcatggcatg
atgggacccagcccaggtcccccagcctctgggcactcccacccacaacaggggccctca
ggatatcctcaggagaatatgcatcagatgcacaaacctatggaaggcatgcatgagaag
ggcatgtctgatgaccctcgctatggaccgatgaagagcatgggcatgagaccaggtgga
ggccacattggaatgggaccccctcctagccccatggaccaacattcccaaggctacccc
tctccactggggggttctgagcactctcccagccccgtgccagccaacggccctcccccc
ggccccatgatgccctctggcccaggtgtccccatggagggaggtgacccccaggccatg
ggccagcagaaccgcattggggtcccaggtccgagtggtggttctgggccaggtggaccc
acccccttcaaccaaaaccagctacaccagctcagggcccagatcatggcctacaagatg
ctggctcgcagccagcccctgccagaccacctgcagatggccgtgcagggcaagaggccc
atgccagggatgcagcagcagccagggatgcccaacatgcccccttcctctgggcctgga
gcggggcctggacagccaccagcaaactacaacagacctcatggaatggtaggcccaaac
atgcctcctccaggaccctcaggtgttccccctggtatgcagggccagcccaccaatgga
ccccctaaacaatggcccgaagggcccatggtgaatgctgctgctccatccagtgccccc
cagaagctgattccccctcagcccactgggagaccctcccctgctcccccctccgtgccc
cctgctgcctccccggtcatgcccccccagacccagtcccctgggcagcctccccagccc
ccacccatggtgctgcaccagaaacagaaccgcatcacgcccatccagaagccccgtggc
ctggacccagtggagatcctccaggagagagagtacaggctgcaggctcgtatcactcac
cgtatccaggagctggagcatctaccagggtctctggccggagacctgcgcaccaaagcc
aacatcgagctcaaggccctgaggctgctaaatttccagagacagctgcgtcaggaggta
gtggtgtgtatgcgtcgtgacacggccctggagacggccctcaacgctaaggcctacaag
cgcagcaagcggcagtccctccgtgaggcccgcatcacagagaaactggaaaagcaacag
aagattgaacaggagcgcaaacgacgccagaaacaccaggaataccttaacagcatcctg
cagcatgctaaagacttcaaggagtaccaccgctccatcacagccaagctccagaaggcc
accaaagctgtggccacgtaccacgccaacactgagcgcgagcagaagaaggagaatgag
cgcattgagaaggagagaatgaggaggctgatggcggaagatgaggagggctaccgtaag
ctgattgaccagaagaaagacaagcgcctggcctacctgctgcagcagacagacgagtac
gtggccaaccttactgatctggtcagagcccacaaggctgatcaggccctcaaggataag
aagaagaagaaaaagaagaagaagaagaagccagagagtggggagggccagcctcctgcc
ctgggacccgacggagagcctctggatgagaccagtcagatgagtgacctgcctgtgaag
gtgatccatgtagatagtgggaagatcctgacggggctggatgcgccccgggctggccag
ctggacacctggctggagatgaaccctgggtatgaagtggcccctcgttcagacagcgag
gacagtggctcagaggaagaggaggaggaagaggtggagccccagccctcccaggctccc
accgaggagaaaaagaagatcccagaccccgacacagaggacgtgtccgaggtcgacgcc
cgctacatcatcgagggagccaagcaggatgtggatgatgagtataacagtgccgaggcg
gcgttcgcccgaggtctgcagtcatactatgctgtggcccacgccgtcactgagacagtg
gacaaacagtccacgctgctggtcaacgggcagctcaaacattaccagatcaagggcttg
gagtggctggtgtccctgtacaacaacaacctgaatgggatcctggctgatgagatgggt
ctgggcaagaccatccagaccatcggcctcatcacctacctcatggagcacaagcgcatc
aacggccccttcctcatcatcgtgcccctctcaacgctgtccaactgggtgtatgagttt
gataagtgggctccaacggtggtgaaagtctcttacaaaggctccccacaagctcgccgg
gcattcctccccatcctgcgcagcggcaagttcaacgtactgctcaccacctacgagtac
atcatcaaagacaagcaagtgctggctaagctgcgatggaagtacatgatagtggacgag
ggccaccgtatgaaaaaccaccactgtaagctgactgtggttctgaacacccactacctg
gccccgcggcgtctgctgctgaccggcaccccgctgcagaacaagctgccggagctctgg
gccctgctcaacttcctgctgccgaccatcttcaagtcctgcacaaccttcgagcagtgg
ttcaacgcccccttcgccatgaccggagagaaggtggatctgaacgaggaagagaccatc
ctgattatccgtcgtttgcacaaagtgctccgtcccttcctgctgcgcagactgaaaaag
gaagtggagtcccagctgcctgagaaggtggagtatgtgatcaagtgtgacatgtcggcc
ctgcagagagtgctgtacagacacatgcaggctaagggtgtgctgctcaccgacggctct
gagaaagacaagaagggtaaaggaggcaccaagaccctgatgaacaccatcatgcagctg
aggaagatctgtaaccatccctacatgttccagcagatcgaggagtccttctctgagcat
ttgggattcactggaggcgtagtgtctggacctgatctgtaccgtgccgctgggaagttt
gagctgctagaccgtatcctgcccaagctgatggtcaccgaccacaaggtcctgctcttc
tgtcagatgacttccaccatgaccatcatggaggactactttggctggcgcaactttaag
tacctgcgtctggacggaaccactaaggctgaggatcgtgggatgcttttgaagaccttc
aatgaccccgcctctaagtactttgtgttcctgctcagcaccagggccggcgggctgggc
ctcaaccttcagtctgctgacactgtggtcatctttgactccgactggaacccacatcag
gatctgcaggcccaggacagagcccaccgtatcgggcagcggaacgaggtgcgtgtgttg
cgtctctgcaccgttcaaagtgtggaggagaagatcctggcggcggccaagtacaagctg
aacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcgtcgagtcacgag
cgccgtgccttcctgcaggccatcctggagcatgaggaacaggacgaggtcggggccccg
gggggctggcgcgctgggggggcgttggaggaggacgaggtgcctgatgatgagaccgtc
aaccagatgattgccaggagcgaagaggagtttgaccagttcatgcgtatggacctggac
cggcgccgcgaggacgcccgcaaccccaagagaaagccccgtctgatggaggatgacgag
ctgcccacctggatcctaaaggatgatgccgaggtggagaggctcacctgtgaggaggag
gaggagaagatgtttggtcgcggctctcgccagcgcaaggaggtggactacagcgactca
ctcacagagaagcagtggctcaaggccatagaggacggtaatctggaggaccttgaggag
gaggtgcgtcacaagaagacgacccggaagcgcaagcgagaccgcgacgacatgcccggc
ccggccacacccagctccagcggtggtggcggtggtcgcagccgtgacaaggatgaggag
gtcaagaaggccaagaaacgcgggcgccctccggctgaaaaactgtcccctaacccccca
tccctcaccaagaagatgaagaaggtggtggacactgtcatcaagtacaaggacggcagc
aatgggcgccagctgagtgaagtcttcatccagctgccctcccgcaaggagctgcctgag
tactacgagctcatccgcaagcctgtcgacttcaggaagattaaggagaggatccgcagc
cataagtaccgcagcctgaatgacctggagaaggatgtgatgctgctgtgtagtaacgct
cagaccttcaacctggagggctctctgatctatgaggactccatcgtactgcagtcagtc
ttcaccagtgtcaggcagaagattgaaaaggagaaggaggaggagagtgagggagaggac
agtgaggaggaagaagaggaggaggtggacgaaggctctgagtctgaatctcgttcagtg
aaggtgaagattaagctggggaggaaggagaaggagggcagagggaagggccagcgccgg
aggggccgtggctcccgggccaaacctgtagtgagcgatgacgacagcgaggaggaacag
gaggaggcgggttctgccagcggcagtgaggagaactga

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