Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364943
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Entry
139364943 CDS
T10872
Name
(RefSeq) xylosyltransferase 2-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139364943
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139364943
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139364943
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139364943
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139364943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
139364943
NCBI-ProteinID:
XP_070958301
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Position
13:48011408..48025032
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AA seq
893 aa
AA seq
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MVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KREAVAWERQNVLSGRSGARWNSRLERTGATAASALRRGTKRRGKHTIRVKVPLGQGVAV
DGVPPHDPSSSRNFTDTRGGGEGAARLPPPVMPGEPGSVEGAPQAPSSDFVPKCDIMGKD
ALSALHRAGSRQCRQEIANIVCQHQAGQLMPRALPQFCPLHGFSSPVQTADELDNDLSKV
ENPVRVAFVLVVHGRAVRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIAQQYPNVR
ATPWRMVTIWGGASLLKAYLHSMQDLLSMLDWNWDFFINLSATDFPTRTNDELVAFLSQH
RDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRRF
VEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCK
CQYKHIVDWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESMVNQEAIDILDTHLYGHYAP
GTVAIKAYWESLFELADGVGSLSDVALTAYSSFFRLGLRSLESSQTSLETCRYEPIGYPV
SVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERLKNLEVGT
EWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDISVDVDAE
YTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVIPLAFKGREPLRQEEDSWLHAGPPG
NMYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTGDLCSTLP
SPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRISPLMTHSDDDDIVALAP
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgtcagagtgcagaagctcctccgacgatacaaactagcgattgccgcc
gcgttaacgattcttctgattcaagggctagtagtatggagtctgagaagtctcgaagag
ggcgaggcggagaggaaaacgcggcggtctaagctacctgaccacaacagccaggacccc
aaaagggaggcggtggcctgggagagacagaacgtcttgtctgggaggagcggggcccga
tggaacagcaggctggagaggacgggggccacggctgccagcgccctccggaggggcacc
aagcgccgggggaagcacaccatcagggtgaaggtgcccctgggccagggggtagcagtt
gatggcgttccccctcatgacccctccagcagccgtaacttcactgatacccgaggtgga
ggggagggggcagccagactaccccctccagtcatgccaggggaaccgggcagcgtggag
ggggcaccccaagcccccagcagcgactttgtgcccaagtgtgacatcatgggcaaggac
gccctgtcggccctgcaccgcgccggctcgcggcagtgccggcaggagatcgccaacatt
gtgtgccagcatcaggccgggcagctcatgccaagggcactgcctcagttctgcccgctg
cacggtttttcgagcccggtccagacagctgatgagctggacaatgacctgtccaaggtg
gagaacccggtcagggtggccttcgtcctggtggtccacggccgggctgtcaggcagctc
aaacgcctcatcaaagccatataccaccgagaccacttctactacatccacgtggacaag
cgttccaactacctgcatcgggaggtgcagcagatcgcccagcagtaccccaatgtgcgt
gccacgccctggcgtatggtgaccatctggggtggtgccagcctgctgaaggcctacctg
cacagcatgcaggacctgctctccatgctggactggaattgggacttcttcatcaacctc
agtgccactgacttccccaccaggaccaacgatgaactggtggcttttctgtcacagcac
agagaccagaacttcctcaagtcacatgggcgggagaatgcgaggttcataaagaagcag
ggtctggaccggctgttccatgagtgtgacaaccacatgtggcggctgggtgagcggacc
atcccagagggtctggaggtgtctgggggctctgactggttctccctcaccaggcgcttc
gtagagtatgtcatcaactcccaagatgagctggtggcgggcctgaaacagttctacacc
tacgccctgctccccgctgagtccttcttccacacagtgctggggaacagtcacatgtgt
gactctctggtggacaacaacctgcgtgttaccaactggaacaggaagctgggctgtaag
tgccaatacaaacacatagtggactggtgcggctgctctcccaacgacttcaaaccacag
gacctcgtcaggatacagcaactgacccggcccacgttctttgcccgaaagtttgagtcc
atggtgaaccaagaggctatagacatcctggacacccacctgtatggacactacgcccca
gggacagtggccatcaaggcctactgggagagcttgtttgagctggcggacggggtgggc
tccctcagtgacgtggccctcacggcctactcttccttcttccgcctgggcctcaggagc
ctggagagcagccagaccagcctggagacctgcaggtatgagccaataggctacccggtg
tcggtgcacctgtatttctacgacgagcgtttccagggctacttggtccgtcaggaggtg
cagaaggtggggtcaagggtcagggaaacggtggaggtgtgggccgtgcctcaggccacc
atgcagctggagaacaacctccgggagtttgagaggctcaagaacctggaggtgggcaca
gagtgggaccccaaggagagaatattccggaacttcggcggtgtgatcgggccgctggac
gagccggtggcggtacagaagtgggttcgggggcccaacctcactgccaccattgtgtgg
atcgaccccgcccagactgtggcggcgtcttatgacatcagtgtggatgtggacgcagag
tacacgcagtacaagcccccgctgcagcggccgctccgccccggggcctggacagtcagg
gtgctgaggctgtgggagcgcgtggccgaggctcgcttcctcgtcatacccctggccttc
aaaggacgagagccactacgccaagaggaggacagctggctgcacgcggggccaccaggc
aacatgtacctggagcagggcttccagcagctgagatctgttctgaagctgcccccacag
gagcccgccctgcaggaggcccagcagagggcccagctggtgggcaagcccctggaagct
tgggtggaccgcacagtgggggccttctgggtgaccggggacctgtgctccaccctgccc
tccccgggcccctgcccttcccttggcccctgtaccaagtccacctggagctccctcgcc
ccagaccctaagtcagaacttggccctgtcaaaggtgacggccggatcagcccactcatg
actcactctgatgatgatgacatagtggcactggctccctga
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