Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364991
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Entry
139364991 CDS
T10872
Name
(RefSeq) TBC1 domain family member 17-like
KO
K19945
TBC1 domain family member 17
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139364991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139364991
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139364991
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
139364991
NCBI-ProteinID:
XP_070958387
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All DBs
Position
13:complement(50385706..50395132)
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AA seq
610 aa
AA seq
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MEPKAETSHKLVFEKEGVYLHTNAKRSNQDTTIPGFIRIVERGGEPALEWSALEDEGRNA
AAVFYTKKDGEGGVEDTNFDPGYEPDWAVISTVKRDRVREHPPVKETSQWSFSLPLSELY
SLRRSRFSLGRNFLVFTSRGGHPLPPLHFHRGGTRELLRALHRYIILAPSPVDGRLFLAY
PHDSGALSQSFDELHLFDDGSSDLVSRFIQDPYATTFGGFSKVTNFFRGALRPPDSPFHP
RGPQDHHGPPSADDEPGFELITCGVELGPKPDVTRGQPLDKWEEFLDPEGRVKDPQQIKE
LVFRGGITPSLRKDVWKFLLGFYPWNSTVKEREDILRMKTDEYFRMKVQWKSVSEEQEMR
NSLLRGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLNDVLMTYCMFNFDLGYVQGMSDLL
APLLFVTQNEVESFWCLTGFMEMVHQNFEESQEAMKQQLLQLSLLMKALDPELLDYLDSQ
DSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMAASILESQRGEFIGS
DHDFNTILKHINELTMKLDLQTVLRGAEANYLQLACCKELPVKVQEVIGLYVPPSPDDET
SPESESHETQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaggctgagactagtcacaagctggtgtttgagaaggagggggtttacctt
cacaccaatgccaagaggagcaaccaggacaccacaatcccaggattcatccgtatagtg
gaacggggtggggagccagctttggagtggagcgcactagaggacgagggccgcaatgcg
gcagctgtattctacactaaaaaggatggagaaggaggggtggaggacaccaactttgac
cctggctacgagccagactgggcagtcatcagcacagtgaagagagaccgagtcagagag
cacccccctgtcaaagagacaagccagtggtcgttctccctgcctctgtcggagctgtac
tctctgcgacggtcccgtttctccctgggccgtaacttcctggtttttactagcaggggt
ggccatcccctccctcctctgcacttccacagggggggcaccagggagctgttgagggcc
ctgcaccgttacatcatcctggccccatcacctgtagatggtcgtctcttcctagcgtat
ccccatgactctggggctctctctcagtcctttgatgagctgcacctctttgacgatgga
agctctgacctcgtctctaggtttatccaggacccttatgccaccacctttgggggattc
tccaaggtcaccaatttcttcagaggggctctacgaccaccagattcccccttccaccct
cgtggccctcaggaccaccatgggcccccctcagctgatgacgaaccaggctttgagctc
atcacctgtggggtggagcttggccctaaaccagacgtaaccaggggacagcctctcgac
aaatgggaggagttcctggacccagaggggcgtgtgaaggacccacagcaaatcaaagag
ctggtcttcagggggggtatcacaccatccctgaggaaggatgtgtggaagtttctgctg
ggtttctatccctggaatagtactgtgaaagagagggaggacattctgaggatgaaaaca
gatgagtatttcagaatgaaggttcagtggaagtcagtcagtgaagagcaggagatgagg
aactccctcctcagaggataccgcagcctgatagaaagggacgtgagtcggacggacaga
cacaacaccttcttctctggcaacgacaacccaggcctgactcttctcaatgacgtgctg
atgacatactgcatgtttaactttgatctgggctatgtccaggggatgagtgacctcttg
gctcctctcctttttgtcactcagaacgaagtggagtccttctggtgtctgacaggtttt
atggagatggtgcaccagaactttgaggagtctcaggaggccatgaagcaacagctcctt
cagctcagcctgctgatgaaggctctggaccctgagctccttgactacctggactcccag
gacagtggctctctgtgcttctgtttccgttggttactgatctggtttaagagagagttc
tccttcgaggacatcctgtccctttgggaggttctttggactcgtctgccctgtgaaaac
ttccatctgctgatggctgcttccattctggaatcacagaggggggagttcatcggctct
gaccacgacttcaacactattctgaagcacatcaatgaactgaccatgaagctggatctg
cagacagtcctacgaggagcagaagctaactacctacagctggcctgctgcaaagagctg
ccggtgaaggtgcaggaggtcattggtctgtacgttccccccagccctgatgacgagacg
agcccagaatcagagtcacatgagacgcagtag
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