Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365042
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Entry
139365042 CDS
T10872
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139365042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139365042
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139365042
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
139365042
NCBI-ProteinID:
XP_070958476
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Position
13:51285551..51393594
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AA seq
374 aa
AA seq
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MSRVPSPPPPADMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NTAEILILADLHSADQLKTQAVDFINYHAAEVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccccgcggacatgtccagcggccctgtggctgag
agctggtgttacactcagatcaaagtggtgaagttctcttacatgtggaccatcaacaac
ttcagcttctgtcgtgaggagatgggcgaggtcatcaagagctccaccttctcttcggga
gccaatgacaagcttaaatggtgtttgcgtgtaaaccctaaaggcctggacgaggagagt
aaagactacctgtccctctacctgctcctggtcagctgtcccaagagcgaggtgcgtgcc
aagttcaagttctccatcctcaatgccaagggagaggagacgaaggctatggagagccag
agggcataccggtttgtccaggggaaggactggggctttaagaagttcatcaggagagac
ttcctgctggacgaggccaatgggctgctgcctgacgacaagctcactctcttctgtgag
gtgagtgtggtgcaggactctgtgaacatctcaggtcagaacactatgaacatggtgaag
gtgccagactgcaggctggccgatgagctgggagggctttgggaacactcccgcttcact
gactgctccctgtgtgtggcgggacaggagttccaggcacacaaagccatcctggcagcc
cgatcgccagtgttcagtgccatgtttgaacatgagatggaggagagtaaaaagaaccgt
gtggagattaacgatgtggagcccgaggtgttcaaggagatgatgtgcttcatctacacg
ggcaaagcccccaacctggacaagatggctgatgacctgctggctgcggctgacaagtat
gctctggagaggctgaaggtgatgtgtgaggatgctctgtgcaccagtctgtctgtggag
aacactgcagagatcctcatcctggcagacctgcacagtgcagaccaactcaaaacacag
gctgtggacttcatcaactaccatgctgctgaggtgatggagacgtctggctggaagtcc
atggtggcatcccacccccacctggtggctgaggcctatcgctccctggcctcggcccag
tgccccttcctgggacccccacgcaaacgcctcaaacagtcctag
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