Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365045
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Entry
139365045 CDS
T10872
Name
(RefSeq) ataxin-7-like protein 3 isoform X1
KO
K11363
SAGA-associated factor 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139365045
03036 Chromosome and associated proteins [BR:
ocla03036
]
139365045
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139365045
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
139365045
SLIK complex
139365045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
SCA7
zf-C2HC_2
NST1
Motif
Other DBs
NCBI-GeneID:
139365045
NCBI-ProteinID:
XP_070958480
LinkDB
All DBs
Position
13:51787886..51797473
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AA seq
372 aa
AA seq
DB search
MKMEDMSLSGLDNTKLEALAQDIYSDLVEDACLGLCFEVHRAVKQGYFFLDDTDQESMKD
FEIVDQPGVDIFGQVYNQWKNKECVCPNCNRSIAASRFAPHLEKCLGMGRNSSRIANRRI
ASSNNMNNKSESDQEDNDDVNDNDWSYGSEKKAKKRKSDKVFLHSLKQHIPLNPNSPRRS
KSVKHKNGELSNSVNADPYKYNYNTGINYETLGPDELRSLLTTQCGVISEHTKKMCTRSQ
RCPQHTDEQRRAVRVFLLGLSASSLPDADTMVESDCYDASDGQVLMSRLQWDGSSDISPS
DSASSKASTNNSDSKKPKKKKKSLGLNSTGGGGGSGSGGGSSSQTSLVGLSNRKKKPKLP
VPPAPSIYDNLN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaggatatgtctctgtcgggcctggacaacaccaagctagaggccttggct
caggacatctactcggacctggtggaggacgcctgtttgggcctgtgtttcgaggtgcat
cgtgctgtcaaacagggctacttcttcctggatgacacggaccaagaaagcatgaaggac
ttcgaaatcgttgaccaaccaggagtggacattttcgggcaagtgtacaatcagtggaaa
aacaaggagtgtgtgtgtcccaactgcaaccggagcattgctgcgtcccgctttgcccct
catctggagaaatgcttgggcatggggcgcaacagcagccgcatcgccaaccgcagaata
gcaagcagtaacaacatgaacaacaaatcagagagtgatcaggaagacaatgatgacgtc
aatgacaatgactggtcgtatggctcagaaaaaaaagctaagaagagaaagtcagataag
gtatttttacattctttgaaacaacatatacctttgaatccaaattcacccagaagatca
aaatctgtaaagcataaaaatggggagcttagtaatagtgtcaatgcagatccatacaag
tacaactataacactggcatcaattacgaaactttaggccctgacgaactgaggtctctg
ttgacaacacaatgtggagtgatctcagagcacaccaagaagatgtgcaccaggtcccag
cggtgcccccagcacacggacgaacagaggagggccgtcagggtgttcctcctggggctg
tccgcgtcgtctctgcccgatgcagacacgatggtggagagtgactgctacgacgcctca
gacggacaggttctcatgagtcgcctacagtgggacggatcctcagacatctccccctcc
gattcagcctcctccaaagctagcaccaacaactccgattctaagaagcccaagaagaag
aagaagtctcttggcctaaacagcacaggaggagggggcggcagtgggagtggagggggc
agtagctcccagactagtctagtaggcctatccaacagaaagaagaagcccaagcttcct
gttccccctgcacccagtatctatgacaacctaaactag
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