Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365104
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Entry
139365104 CDS
T10872
Name
(RefSeq) SUN domain-containing protein 1-like isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139365104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139365104
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
139365104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
Thioredoxin_9
Motif
Other DBs
NCBI-GeneID:
139365104
NCBI-ProteinID:
XP_070958585
LinkDB
All DBs
Position
13:complement(54972015..55020463)
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AA seq
1127 aa
AA seq
DB search
MTMDFSRLHTYTPPQCAPENTGYTYSLSSSYSTVALEFEKVHQIAPVFNSPRMSRRSLRL
QTTGGLYGNDSLADFSSQNHSSGGSSQRESWMVRSRKHQQQSASSSLSLNQSLSLNQSLS
LNQSLSLNQTPRKTLSFSTTNTPSTGCTTASDASLLSSILDQSSLRQRSNTTTTTDGYWG
SDQDTSLKGRSSRTDHSSTGANGGVNTVSHSHAMVANGYICKDCFIHSERKESLTTYSSS
SSSQAASAAAAAATFSSSSSQAASAAAAAASLSSSSSSQAASAAVAAAAISSSSSSASSS
SLYSTVKSQRSKTGLLVSVSNTCVHYSRRALTPIVSLMTLLFQNILWLGTRARSHSGKGV
LASLLDRARRAVSSSASRVSWLFKQTTLHRMMGYRANGYEGKAHSSYCGSMNVKDHVMGD
GHHHFLNGSLCDDCKGKQHLETNTLVHSHIQTSRTLRLLGGLWTLIVYTGYCLLQPGYYV
VRAGLALGSAVGSAVRSVAQRLLSVLCLVLGAPGKAARRLLWCLGTGWYQLVSFMSLFNV
FFLTRCLPRMWKLLLFLLPFLIFLWLWFWGPSSFLSYLPAINLTEWRSRVVSPFTLSSFI
LTPALVPTPATPLEQTPTATPGPQAQPVLPPIVTVDTEGLERLERVEHGLTLLWERLKQG
DQRQEQHHGDTLAQYTLLREQLDSQTDRDSLGLWVSGLLEHRITLLRGELEQQEASHRAQ
TEEQRVQQQQSQETRLAELEGLLQVLATKTEAVQQKQKQRKEETEETATPAPASVPVSVG
VGPEAPAALLAEVQRLEGELGRIRGDLQGVMGCQGKCEQLNTIQETVSAQVSAQVRRELQ
ALFYGSDDQTHQGEPDIPEGLLQWLSSRYVSGADLQTLLTNLELSILRNVSLQLEQSRAE
ARTEAEARAAVITTQTQAITQSVQHTAVGEGLSEEQVQLIVQNALKLYSQDRTGLVDYAL
ESGGGSILSTRCSETYETKTALMSLFSVPLWYFSQSPRVAIQPDVYPGNCWAFKGSHGYL
VIRLSLRILPTAFCLEHIPKALSPTGNIASAPRNFTVYGLDDEYQEEGKLLGQYTYQEDG
DSMQNFPVMEKNERAFQIIEVRVLTNWGHPEYTCLYRFRVHGEPRIQ
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatttctctcgcctacacacatacactcctccacagtgtgctccagagaac
acaggatatacctactccctcagctccagctactcgactgtggccctagagtttgagaag
gtgcatcagatcgctcccgtcttcaactcgcccaggatgtcgcggcggagcctgcgtctg
cagaccactggcggtctctatggcaacgacagcctggctgacttctcctcccagaaccac
agcagcggagggtccagtcagagagagtcatggatggtgaggagcagaaagcatcagcag
cagtctgcctccagctccctgtccctgaaccagtccctgtccctgaaccagtccctgtcc
ctgaaccagtccctgtccctgaaccagacgccacgcaagaccctctccttctccactacc
aacactccctctacgggctgcaccactgccagcgatgcctccctgctatcctccatcctg
gaccagtccagcctccgtcagcgatccaacaccactactaccacagacggctactggggt
tcagatcaggataccagtctgaaagggaggagttcaaggacggaccacagctcaacgggt
gcgaacggcggcgtcaacactgtgtcgcacagccacgccatggtcgccaacggttacatc
tgtaaagactgtttcatacactctgagaggaaagaatctctcaccacatactcctcctct
tcctcgtctcaggctgcctctgcagcagcagctgccgccaccttctcctcttcctcgtct
caggctgcctctgcagcagcagctgccgcctccctttcatcctcttcctcgtctcaggct
gcctctgctgcagtagctgctgccgccatctcatcatcatcatcatcagcctcatcctcc
agtttatacagcacggtcaagagtcagaggagcaagacaggtctcctggtgtcagtctct
aacacgtgtgtccactacagcagacgagccctgacccccatagtgtccctgatgacactg
ctcttccagaacattctgtggctgggcacaagagccaggagccactcaggcaaaggtgtc
ctggcgtccctattagacagggccagacgggctgtctcctccagcgcgtcccgtgtctct
tggctctttaagcagaccactctccacaggatgatgggctacagggccaacggctacgaa
ggcaaagctcactccagttactgtgggagcatgaatgtaaaagaccacgtgatgggagac
ggacaccaccactttttaaatggctcgttgtgtgacgactgtaaagggaagcagcacctg
gagaccaacacactggtccacagtcacatacagacctccagaactctccgtctactgggg
ggtctgtggacccttatagtttacacaggctactgtctgctccagccaggttactatgta
gtgagggcaggcctggcgctggggtcagcagtggggtcagcagtacggtcagtggctcag
agactgctgtcagtgctgtgtctagtcctgggagctccaggtaaagcagccaggcggttg
ttgtggtgtctggggacaggctggtaccagctggtgtctttcatgtctctgttcaacgtc
ttcttcctgacccggtgcctgcccagaatgtggaagctcctcctcttcctccttcccttc
ctgatattcctgtggttgtggttctggggtccgtccagtttcctctcctaccttccagcc
ataaacctgacagagtggcgctccagagtggtgtcccccttcaccctctcatcgtttatc
ctgacccctgcccttgttcccacccccgccacaccactggagcagacccccacagcaacc
cccggcccacaggcacagccagtccttccccccatagtcaccgtggacacagagggcctg
gagcgtctggagcgggtagagcatggtctgaccctgctgtgggagcggttgaagcagggg
gaccagaggcaggagcagcatcacggggacaccctggcccagtacaccctcctgagggag
cagctggacagccagacagacagagacagcctgggtctctgggtctctggtttgctggag
cacaggatcaccctgctgagaggagagctggagcagcaggaggcctcacacagggcacag
actgaagagcagagggttcagcagcagcagagtcaggagacacggctagctgagctggag
gggctgctgcaggtcctcgctactaaaactgaggcggtgcaacagaaacagaaacagcgg
aaggaggagacagaggagacagccacaccagcccctgcctctgtccctgtcagtgtgggt
gtgggcccggaggcccctgctgctttgctggcggaggtgcagaggctggagggggagttg
ggtcggatcaggggcgacctgcagggggtgatgggatgtcaggggaaatgtgagcagctg
aacacaatccaggaaacggtgtccgcccaggtgtccgcccaggtgaggcgggagctgcag
gccctgttctacggctctgacgaccagacccaccagggagaacccgacatccccgaagga
ctcctccagtggctgtcgtcgcgctacgtgagcggggccgacctgcagaccctcctgacc
aacctggagctcagcattctgaggaacgtgtcgctgcagctggagcagagcagggccgag
gcccggacggaggctgaggccagggctgcagtcatcaccacccagacccaggctattaca
cagagtgtccaacacaccgccgtgggcgagggactgtctgaggagcaagtgcagctgatc
gtccagaatgccctgaaactctactcccaggataggacgggcctagtggactacgccctg
gagtctggaggcggtagcatcctaagcacgcgctgctcggagacgtacgagacaaagacg
gccctcatgagtctgttcagcgtgcccctctggtacttctcccagtcgcctcgcgtcgcc
atccagcctgatgtgtatccagggaactgctgggcgtttaaaggttctcatggttacctg
gtcatccggttgtccctgaggatcctccccacagccttctgtctggagcacatccccaag
gccctgtcccctaccggcaacatcgccagcgccccgcgcaacttcactgtctatggtctg
gatgatgagtatcaggaggagggaaagctgttgggtcaatacacctaccaggaggacgga
gactcaatgcagaacttccctgtcatggagaagaacgaaagggccttccagatcatcgag
gtgcgggtgctgaccaactggggtcaccccgagtacacctgcctctaccgcttcagagtc
cacggagaaccacgcatccagtga
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