Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365109
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Entry
139365109 CDS
T10872
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139365109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139365109
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
GGA
139365109
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
VCIP135_N
TraC-like
DUF6675
Motif
Other DBs
NCBI-GeneID:
139365109
NCBI-ProteinID:
XP_070958597
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All DBs
Position
13:55096698..55114076
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AA seq
726 aa
AA seq
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MSSRDVSNAMAYQEGETLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQISVRLLV
HKIQSPQEWEALQALTVLEACMKNCGRRFHNEIGKYRFLNELIKVVSPKYMGDRVPEKVK
TKIIEMLYSWTVAFPNEAKINEAYQTLRRQGLVTMDPELPVDKTLIPSPPTRPKNPVFDN
EDMGKLLAELLRSKNPEDLQEANRLIKNMVKEDDVRVQKVTKRIHTLEEVGINVKLLSEM
LSHYDKDRSSQSDREIIKELYDRCDKLRRAAFKMATETEDNDTSLGDILQASDDLSRVIN
SYKKIVKGQTVNGDIEDPRSAAGEETTGNSDNTETLIDLAGIDVPNSTSPPPAPLPLVSD
PTSANHLGFPIPVLPPPPKRLAGLHASQNSSPSHPATDKALNALSLLDDELLSLGLNDPV
PSLNSQSKPTLNEIANPWTSLQAPDPGLDLFGTIAGPGPVFPPVQPAPAPATAPATHSLQ
DLQDLAMLDFGEPKSLRVGGGFGMAASMGAVVPPSLGAMVPQVPLSSTSLLPGPMPGSPA
LSHTKAQTLSSAPGSPLFSSLSPFHHSSFQGGSPARGLGPEASLGNVHVPLEAIRPSKGL
PVTAYDKDGVRVLLNFASDCPPCRPDVLVLVVSMLNTAPLPVQNVVLQAAVPKSMKVKLQ
PPSGTELPPFNPTLPPASITQVMLLANPLKEKVRLRYKLAFTLGNRQCSEVGEVDQFPPP
DRWGHL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgcgatgtttccaatgctatggcgtaccaggaaggggagacgctagaatcc
tggctcaataaagccacccatccaacaaacagacaggaggattgggagtacatcatcggt
ttctgtgaccagatcaataaggaattggaaggtccccagatatctgtcaggttgctggtt
cacaaaatccaatcgccgcaagaatgggaggcgcttcaggctttaacagtattagaagca
tgtatgaagaactgcgggagaaggtttcataatgaaatcgggaaatatcggtttctgaac
gagctgatcaaagttgtttctcctaagtacatgggagacagagtaccagagaaggtaaag
acaaagattattgagatgctgtacagctggacagtggctttccccaacgaggccaaaatc
aacgaagcataccagacactaaggagacagggccttgtaactatggaccctgagctccca
gtggacaagactctgattccttcaccccccacacgtcccaagaaccctgtgtttgacaat
gaggacatgggcaagctactagcagagcttctgaggagcaaaaacccagaggacctgcag
gaagccaacaggctcatcaagaacatggtgaaggaggacgatgtcagggttcagaaagtg
accaaacgcatccacaccctggaagaggtgggcatcaacgtcaagctgctgagtgagatg
ctgtcccactacgacaaggacaggtcctcccagtcagacagagagatcatcaaggaacta
tacgaccgctgcgacaagttgagacgcgctgctttcaaaatggccacagagactgaagat
aacgacacaagtttaggtgacatcctgcaggccagcgatgacctctcacgggtcatcaac
tcctacaagaagattgtcaagggacagaccgtgaatggagacatcgaggatcctagatct
gcagctggtgaagagaccacagggaacagtgacaacacagagaccttgattgacctggct
ggcattgacgttccaaactccacctctcctccgcctgcccctctcccattggtctccgat
cccacttcagccaatcacctggggttcccaatccctgtcttgcctcctcctccaaaaagg
ttggccgggttgcatgccagtcagaacagcagccccagccacccagccaccgacaaggcc
ctcaacgctctctctctccttgacgatgagctgctatccttaggcctgaacgatccagtt
ccttctctgaacagccaatcaaaaccaacgctgaatgaaatagcgaatccgtggacctcc
ttacaggctcctgaccctggcctggacttgtttggcactatagcagggccaggcccagta
tttcccccagtccagccagcgccagcccccgccacggcccctgccacccacagcctccag
gacctccaagacctggccatgctggactttggagagccaaagagtttgcgtgttggcggc
ggattcgggatggcagcctctatgggggccgtagtaccaccctccttgggggccatggta
ccacaggtccccctctcctcgacctccctcctccctggccccatgcctggctcccctgcg
ttgtcccacaccaaagcccagacgctgagctctgccccaggcagccccctgttcagctcc
ctctcccccttccaccactcctccttccaggggggcagcccagccagggggctaggaccg
gaggcctccctgggcaacgtgcacgtccccctggaggccatcagacccagtaaagggctc
cctgtaacggcctatgataaggatggggtgcgtgtgctgttgaactttgcctcagactgt
cccccttgcagaccagacgtgctggtgttagtggtgtccatgctgaacactgcaccactg
cccgttcagaacgtggtccttcaggccgccgtgcccaagtccatgaaggtgaagctgcag
cctccgtcaggaacagagctgcctccctttaaccccacccttcccccggcctccatcaca
caggtcatgctgctggccaatcccctgaaggagaaggtgcgtctgcgctacaagctggcg
ttcactctcggaaacaggcagtgctcagaggtgggcgaggtggaccagttccccccgcca
gacagatggggtcacctatag
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