Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365133
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Entry
139365133 CDS
T10872
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139365133
03041 Spliceosome [BR:
ocla03041
]
139365133
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139365133
mRNA cycle factors
Stress granule specific factors
139365133
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
General mRNP proteins
139365133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
Motif
Other DBs
NCBI-GeneID:
139365133
NCBI-ProteinID:
XP_070958691
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All DBs
Position
1:14114266..14120499
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AA seq
374 aa
AA seq
DB search
MAVRRGHIRYLKVCEVQSCQGDNRESQQHVSKGSINMKQDAYDNGYDEHMEDEPKDAKTN
LIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYVNASD
AERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLPKTMTQKDVEDMFTRYGRII
NSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAASPNQAKNS
QLINQLYHNQGRRFGGPVHHQAQRFRFSPMSVDHMSGMSTVSAQGNSTAGWCIFIYNLGQ
DADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDK
VLQVSFKTSKGGHK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacatcagatacctcaaagtgtgtgaggtacagagttgtcag
ggtgacaatagggaatcacaacagcatgtcagtaagggttcgattaacatgaagcaagac
gcttatgataacggttacgacgaacacatggaagatgagcccaaagatgccaaaaccaac
cttattgtcaattacctgccccagaacatgagtcaggacgagttgcggagtctcttcagc
agcatcggcgaggtggagtctgccaaactcatccgcgataaagtggcaggtaatccctat
cacaaaaaccagagccacagtttagggtacggatttgttaactatgttaacgctagtgat
gcagaaagggctatcaataccctcaatgggctgagactacagtctaaaactatcaaggtg
tcctttgccaggccgagctctgacggtattaaggatgccaatctttacattagtgggctg
cccaagaccatgacacagaaagacgtggaggatatgttcacacgctatggccgcatcatc
aactcgcgtgtattggtcgatcaggcctctggcctgtccaggggtgtggcctttatccgc
tttgacaaacgggccgaggcggaggacgccatcaaagacctgaacgggcagaaaccccct
ggtgcctcagagcccatcacagtgaaatttgctgccagccccaaccaggccaagaactct
cagctcatcaaccagctctaccacaaccagggccggcgctttggaggtccagtacaccac
caggcccagagattcaggttctctccaatgagtgtggaccacatgagcggcatgtctacg
gttagcgctcaggggaactccacggctggctggtgtatcttcatctacaacctgggccag
gacgctgacgagggcatcctgtggcagatgttcgggccgtttggagccgtcaccaacgtc
aaggtcatccgagacttcaacaccaacaagtgtaaaggcttcggcttcgtcaccatgacc
aactatgaggaggccgccatggccatcgccagcctcaacggttaccgcattggagacaag
gtcctgcaggtttcattcaaaaccagcaaggggggtcacaagtaa
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