Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365137
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Entry
139365137 CDS
T10872
Name
(RefSeq) ubiquilin-4-like
KO
K04523
ubiquilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139365137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139365137
03051 Proteasome [BR:
ocla03051
]
139365137
Membrane trafficking [BR:
ocla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
139365137
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139365137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
UBA_7
YukD
Rad60-SLD_2
UBA_HOIP
Dsc3_N
CUE
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
139365137
NCBI-ProteinID:
XP_070958655
LinkDB
All DBs
Position
2:complement(26140248..26145978)
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AA seq
590 aa
AA seq
DB search
MAENSGTDPTVDSNVVENAASDGTMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKTTVGGTSQSSASSSGTPQAN
SSINPSAVPNASTTPGTGPTPASTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAL
GGNLDSGVQPSRTENREPLPNPWGPPGTSPSESRGTGASTTTTSSAGGTAPSASNPLGIN
TSGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPELASQAMLNNPL
FAGNTQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGEIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGGSL
TLTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacagcggcacagatcccactgtggattccaacgttgttgaaaatgctgcc
tcagacgggaccatgatcgtggtcacggtaaaaactccgaaagataaagaggagatagcg
atctcggaggattcttctgtcgcacagtttaaagaggagatatccaaaaggtttaatgcc
aagcaggaccagctggtgttgatttttgctggcaaaatcttaaaggatggagacacactg
aaccaacacggcatcaaggacggactcactgttcaccttgtcatcaagactgctcccaag
accacagttggtggcacatcccagtcctctgcatccagctctgggaccccccaggccaac
agcagcatcaatcctagcgcagtgcccaatgccagcacaacaccaggcactgggcctacc
ccagcctccacacagccacccaacttactcagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcagccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcagatcatggacaaccctctggtgcagaacatgatg
tctaacccagacctgatgaggcagatgattgtgaccaaccctcagatgcagcagctgatg
gagcgtaaccctgagatctcccacatgctcaacaaccctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcattcctgggggatacaacgccctccggaggatgtacacagacatc
caggagcctatgttcagtgccgctagagagcagtttggaaacaatcctttctctgctttg
gggggcaacttagactctggcgtgcagccctccagaacagagaacagggaacccttacca
aacccatggggaccccctggaacgtccccctcagaaagcagggggactggcgcctccaca
acaacaacctcctccgctggcgggactgcacccagtgcctccaaccccctgggcatcaac
acctctgggctgggcaatggtgtattcggtagccctggcatgcagagtctgatgcagcag
atctctgagaacccccagctcatgcagaacatgctgtctgcgccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgaactcgcctcgcaggcaatgctgaacaaccccctc
tttgccggaaacacacagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtccgtgatgactaacccccgggccatgcaggctctc
atgcagatccagcagggcctgcagaccctacagacagaagcccccgggctcatgcccagt
ttggctcctggtgagatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aaccttcctcccccaacacagggctcaaatcccaccgctgccactaacccatcccagcaa
cagcagcagctcatgcagcagatgttacagatgtttgctgggggaggaggcggctcattg
actctaaccccggaggtgcggtttcagcagcaactggaccagctcagcgccatgggcttc
atcaaccgcgaggccaacctgcaggccctcatcgccacggggggagacatcaatgctgcc
attgagagactgctgggctcccagccctcctaa
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