Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365177
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Entry
139365177 CDS
T10872
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139365177
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139365177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139365177
NCBI-ProteinID:
XP_070958725
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Position
13:complement(59146082..59153463)
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AA seq
721 aa
AA seq
DB search
METLIIKNEENTEESHPTTGSKDVTTSMINMWDLNLNQEQEDPTTTHDKPGENTQPQNQE
QEDPTTTHNKPGENTQPQNQEQEDTTTTHDKPGENTQPQNQEQEDPTTTHDKPGQNTQPQ
NQEQEDPTTMHDKPGENTQPQNQEQEDPTKTHNKPGENTQPQNQEQEDPTKTHDKPGENT
QPQNQEQEDPTTTHDKPGENTQPQTISSGFTVTPEDVLCDSCIEIPCRAQKSCLTCLVSY
CEAHLRPHVENQRFQNHRLVEPLQDIECRTCEEHRLPLELYCLTDGCGVCVCCKCEGQGH
LGHSTVPVEEARRQIQTELQKKQGEIMKTVSVAENSIGKLQSNTASIESSVAGVRAVMEQ
QFYLLQGAVEEARRRATEVLEGEQRQALSQAEGIQAHLEQKSQELKKTLARVERLFRNKR
DVDFLQEYSEWKTGAVDVCLPGLYVGLTDRLASFSCLLTESTQELCDQLKATYRDKLKDI
CRTEKLGITTMVHPKMSKSFSLPEPEMRDDFLTYASSLTFDPDTVHKFLRLTEDDRKVTN
TTPWQHSYPDTPERFEYWRQVMTSESLYLGRHYFEAELSGEGVHVGLTYKSIDRKGVERG
SCITGNDFSWSLGREGRSFSTWHADMEAVVEATSVFTRIGVYIDFDSGSLAFYGVTDIAM
TLLYRYKAEFMEPLYPTVWLSKKDSVVLLVGPKDPPLMKSSTLPATPITPMATSAPVSPE
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctcatcatcaagaatgaagagaatacagaagagagtcatcccacaactgga
agcaaagatgtcaccacatccatgataaacatgtgggacctgaacctaaaccaggaacaa
gaggacccaacaacaacgcacgataagccaggggagaacacccagcctcagaaccaggaa
caagaggacccaacaacaacgcacaataaaccaggggagaacacccagcctcagaaccag
gaacaagaggacacaacaacaacgcacgataaaccaggggagaacacccagcctcagaac
caggaacaagaggacccaacaacaacgcacgataaaccagggcagaacacccagcctcag
aaccaggaacaagaggacccaacaacaatgcacgataaaccaggggagaacacccagcct
cagaaccaggagcaagaggatccaacaaaaacgcacaataaaccaggggagaacacccag
cctcagaaccaggaacaagaggatccaacaaaaacgcacgataaaccaggggagaacacc
cagcctcagaaccaggaacaagaggacccaacaacaacgcacgataaaccaggggagaac
acccagccccagacaatctctagcgggtttactgtcaccccagaagatgtgctgtgtgac
tcctgcatcgagatcccgtgccgggcccagaagtcctgcctcacctgcctggtgtcgtac
tgcgaggcccacctcagaccccacgtggagaaccagaggttccagaatcaccggctggtg
gagcccttacaggacatcgagtgtcgcacctgtgaggagcaccggctaccgcttgaacta
tactgcctgacggacggctgcggtgtgtgtgtgtgctgcaagtgtgagggacaggggcat
ctggggcacagtactgtacctgtagaggaggctcgaagacagatccagacagagctgcag
aagaaacaaggggagattatgaagaccgtctcagtggcagagaattccattggcaagcta
cagagcaacactgcatccatagagagctcggtggcaggggtacgtgctgtgatggagcag
cagttctatctgctgcaaggggccgtagaagaggcccggaggagggccacggaggttctg
gagggggagcagaggcaggcgctcagtcaggccgagggcatccaggcccacctggagcag
aagagccaagagctgaagaaaaccctggccagagtggagagactcttcaggaacaagagg
gatgtagacttcctgcaggaatactccgagtggaagacgggggctgtggatgtctgtctg
cctgggctctacgtcggcctcacagatcgcctggcctccttcagctgcctgctgactgag
tccacccaggaactgtgtgaccagctcaaggctacctacagggacaaactgaaggacatc
tgcaggactgagaaactgggcattacaaccatggtccatcccaagatgtcaaagtctttt
tcactgcctgagcctgagatgcgagacgacttcctcacgtatgccagcagtctgaccttt
gacccagacactgtccacaagttcctgagactaactgaagacgacaggaaggtgaccaac
accacgccctggcagcacagctacccagacacgcccgaacgcttcgagtactggcgccag
gtgatgacctcagagagcctctacctgggccgacactactttgaggcagagttgagtggg
gagggcgtgcacgtgggactcacctacaagagcatcgaccggaaaggcgtggagagaggc
agctgcatcacaggaaatgacttctcgtggagcctcggaagggaggggcggagcttttcc
acttggcatgctgatatggaggcggtcgtggaagccacaagtgtgttcacgagaatcggc
gtctacatcgactttgactcaggctcattagctttctatggtgtgactgacatcgctatg
acactcctctacaggtacaaggctgagttcatggagcccttgtatcctactgtctggctc
tcaaagaaggacagtgtggttttattggttggtcctaaggaccccccactaatgaagagc
tcaactctgcctgccacccccatcactcccatggcaacatcagctcctgtcagtccagaa
tcataa
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