Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365204
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Entry
139365204 CDS
T10872
Name
(RefSeq) medium-chain acyl-CoA ligase ACSF2, mitochondrial-like isoform X1
KO
K23617
medium-chain acyl-CoA ligase, mitochondrial [EC:
6.2.1.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139365204
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
139365204
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
139365204
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
139365204
NCBI-ProteinID:
XP_070958774
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Position
13:complement(61792160..61810894)
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AA seq
647 aa
AA seq
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MSAVWISSSLLRSRATHLRQLSVFSRRAVLQPLQVVSSLQKTWTPGNPTWCCRSLHVDSP
PLVPGQSFSYVHGASSVSLLGQTVGQSLQAAADRWPHREALVFLQDGVRKTFSQFQEDVD
QAAAGLLALGLKRGDRLGVWGPNTYHWILFQFATAKAGIILVSINPAYQLKELEFTLGKV
QCKAVVCPTQFKTQRFCDTLRQICPEMDTAESGVFRSSRLPDLRMVIVTDSRQTGTVHVE
DVMQAGSRQHHQELQDLQTKLSFDDPINIQFTSGTTGSPKGATLSHHNIVNNAYFVGLRL
GFNWKPIRACVPVPLYHCIGSVIGGMCMALHGITLVFPSAGYDSRANLEAIQNERCNFLY
GTPTMYIDMLGQPDLHNYDLSSVESGFTGGSLCPPEVMRKLRTDMNVKDMIIGYGTTENS
PAAFVGFPRDNEELKTETVGCILNHAEAKVVDVSSGEVVPLGDPGELLIRAYSVMLEYWD
DPDRTSEAIAKDRWYRTGDIASLDRFGYCRIVGRIKDMIIRGGENIYPAEIEKFLHTHPN
VQEAQVRTIPTYRRPRCLFSLPVLSTSLSPQVIGVRDERLGEQVCACIRLKEGLDCSREE
IRDFCKGQISHFKIPHYVVFVDSYPLTASGKVQKIKLREEMEKKLGL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggtgtggatcagctcctcgctactgaggtccagggcaactcacctcagacag
ctcagtgtgttctctagaagggctgtgttacaacctctacaggtggtctcctcactacag
aagacatggacgcctgggaacccaacctggtgctgtagatccctccatgtggacagtccc
cccctggtcccagggcagagcttcagctacgtccatggggcctcctcagtgtccctgctg
ggccagacggtgggtcagagtttgcaggcggcagctgaccgctggccccacagagaggcc
ctggtgttcctgcaggatggagtccgtaagaccttctcccagtttcaggaggacgttgac
caggccgctgcaggtctcctggccctgggtctgaagagaggggacagactaggagtctgg
gggcccaacacataccactggatcctgtttcagttcgccactgccaaggctggcatcata
ctggtgtcaataaacccagcctatcagctgaaggagctggagttcaccctggggaaggtg
cagtgtaaagctgtggtgtgtcccacccagtttaagacccagaggttctgtgacacgctg
agacagatctgcccagagatggacacagcagagtcaggggtcttcaggagctccagacta
ccagacctgcgtatggtgattgtgacagacagcagacagacagggactgtacatgtagag
gatgtgatgcaggctggaagcagacagcaccaccaggagctgcaggacctgcagaccaaa
ctgtccttcgacgaccccatcaacatacagttcacatccggaacaacaggaagtcctaaa
ggtgccaccctctcccaccacaacattgtcaacaacgcctattttgtgggtcttcgtctg
ggattcaactggaagcctataagagcgtgtgttcctgttcctctgtaccactgcataggc
tcagtgatcggagggatgtgcatggcactgcatggcatcaccctggtcttcccctctgct
gggtacgacagccgtgccaacctggaggccattcagaatgaaaggtgtaatttcctctac
ggaactcctaccatgtacattgacatgcttggacagcctgacctacacaactatgacctg
tcatcagttgaatctgggtttacgggtgggtctctttgtcctcctgaagtcatgaggaaa
ctcagaactgatatgaatgttaaggatatgataataggctatgggaccacagagaacagc
cctgcggcatttgttggtttcccacgagacaacgaggaactgaagaccgagacagtggga
tgtatcctgaaccacgctgaggcgaaggtggtggatgtgtcctctggagaggtggttcct
ctgggggatccaggagagctgctgatcagagcttactctgttatgctggagtactgggac
gacccagacaggaccagtgaggctatcgccaaagaccgctggtacagaaccggtgacata
gccagtctggacaggtttgggtactgccgtatagtgggacgtataaaggacatgattata
cgtggaggagagaacatctaccctgctgagatagagaagttccttcacacccatcccaac
gtacaggaggcccaggtgagaaccatcccaacgtacaggaggcccaggtgtttattttct
ctccctgtcctgtccacctctctttctccccaggtgattggtgtgagagatgagaggttg
ggggaacaggtgtgtgcctgtattagactgaaggagggactggactgtagcagagaggag
atcagagacttctgcaagggacagatttctcacttcaagatcccccactatgtggtgttt
gtggacagctatccactgacggcctctggaaaggtccagaagatcaaactgagggaggag
atggagaagaagctgggtctgtga
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