Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365229
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Entry
139365229 CDS
T10872
Name
(RefSeq) claudin-6-like
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecules
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139365229
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139365229
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139365229
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139365229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139365229
04147 Exosome [BR:
ocla04147
]
139365229
04515 Cell adhesion molecules [BR:
ocla04515
]
139365229
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139365229
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139365229
Exosomal proteins of colorectal cancer cells
139365229
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
L1 family
139365229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
Motif
Other DBs
NCBI-GeneID:
139365229
NCBI-ProteinID:
XP_070958830
LinkDB
All DBs
Position
13:complement(62489342..62493628)
Genome browser
AA seq
214 aa
AA seq
DB search
MATTGMQLLGLILSLVGWVGGFLVCSVPLWRVTAFIGNNIVTAQIIWEGLWMTCIVQSTG
QIQCKVYDSLLALPSDMQAARGLTVLSVLLCGLALALGVVGVKCTKCIGQNSLKARIARI
SGFLFGIAGFLYLVPICWTAHSIIRDFYDPHVAAPHKRELGPALYLGWGASALLLIGGSL
LYAGSSPPGIPGSPTFSSDSSPRRGPAAQVKGYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccggcatgcagctcctgggcctgatcttgtctctggttggctgggtgggc
ggcttcctggtatgctctgttccgctgtggcgtgtcaccgccttcatcggcaacaacatc
gtgacggctcagatcatctgggaggggctgtggatgacctgcatcgtccaatcaacgggc
cagatccagtgcaaggtgtacgacagtctcttggccctgcccagcgacatgcaggcggcc
cggggcctcaccgtgctctccgtcctcctctgtggcctggccctggctctaggtgtggtg
ggggttaagtgcaccaagtgtattggtcagaatagtctgaaggctcgtattgcaaggatc
tccggctttctgttcggcatcgctgggtttctctacctggttcctatctgctggacggcc
cactccattatcagggacttctatgatccccacgtggccgcgccgcacaagagagagcta
ggccccgccctatacctaggctggggggcgtcggccttgctcctgattggtgggtcgctg
ctgtatgcggggtcgagtcctcccggcatccccgggtctccgaccttcagcagcgacagc
agcccccgtagaggacctgctgctcaggtcaaaggttacgtctga
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