KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365239
Entry
139365239         CDS       T10872                                 
Name
(RefSeq) coilin-like
  KO
K13150  coilin
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139365239
Spliceosome [BR:ocla03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    139365239
SSDB
Motif
Pfam: Coilin_N Tudor_Coilin
Other DBs
NCBI-GeneID: 139365239
NCBI-ProteinID: XP_070958842
LinkDB
Position
13:63571293..63581198
AA seq 673 aa
MAASNTNVIRVRLYFDYPPPSVTDCRMCWVLVDLNKCRVVADIASVIREKFDFSRRSILS
LFIEDCYLPHTESVYVVRDNDSIRVKVDTLTLSSGSQSSTSVVKSKKRRRAAEEEEEPTQ
NRVSEEWKKKKKRKKESQEADSNQAAVEERRKEDKKKQKKKDKVSTKTTASSTGPPPTSS
TGPPPTSSTGPSPTSSTGPSPTSSTGPSPTSSTGPSPTSSTGPSPTSFTGPSPTVVKADK
NTKKAPAATAVSVNGKATAKTPNGETDDSSDSSESSSEEEEAPSKTPMQKLPPKSHSASS
TPPVTSKATPVVKPQVPIKKPRPPPSSSDSDSSDSSGDDASSKATAAKPPVKNQTPLSKP
AATPPTTTPTGSGAGPRDKTTPSRPSLPSSGPRTSVSPGQRANAPGPGSTPAVQKAHRRP
ESPCSSSSSEEEIQLVIKQPGLGMGIVPAMAAQPTWRGRGSPRGVERGGGRGIRGRGDGG
QSWGGGGRGVRGEWDRGPRGGGRGGEWDRGPRGGKGGRGEDAGFYFNYEGGQRQQTPQPP
SYQKDSLNNSSVVFQNPSESVPKRDYSKMPLLAAPPQDGQKIAFKLLELTENYTPEVSEY
KEGKIIHFDHSTKQIELELLSAYQAPVEPGKFDLVYQNADGSESVEYAVSRGSRVTERWD
SLLEPRLVVGNLS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcagcctccaataccaatgtgatacgggtgcgattgtattttgattacccgccgccc
tcggtaaccgactgtcgcatgtgctgggtcctcgtggatctgaacaaatgccgggtggta
gcagacatagccagcgtgatcagggaaaagttcgacttcagtcgcaggagcattttgagt
ctgttcattgaagactgctacctgccgcacacagagagcgtctacgtagtccgagataac
gacagcatcagagtcaaggtggacaccttaaccctttcgagtggaagtcagtcgagcaca
tctgttgtgaagtccaagaagaggaggagagctgccgaggaggaggaggagcccacacag
aaccgagtgagtgaagagtggaagaagaagaagaagagaaagaaggagagtcaggaggcc
gattccaaccaggctgcggttgaagagaggaggaaagaagacaagaagaaacagaaaaag
aaagataaggtgtcgaccaaaaccactgcctcgtccacaggaccccctcccacctcatcc
acaggaccccctcccacctcgtccacaggaccctctcccacctcgtccacaggaccctct
cccacctcgtcaacaggaccctctcccacctcgtccacaggaccctctcccacctcgtcc
acaggaccctctcccacctcgttcacaggaccctctcccaccgtagtcaaagcggacaaa
aacaccaagaaggctccagcggccacagcagtatctgttaacggtaaagccacagcaaag
accccgaatggggaaacggacgactcttctgattccagtgaaagcagtagtgaggaggag
gaggcccccagtaaaacccccatgcagaaactaccccccaaatcacactctgctagctct
acaccccctgtcacatctaaagccacccctgtagttaaaccccaagtccccattaagaaa
ccacgcccacctccctcatcatctgattcggactcgtcagactcatcgggtgacgatgcc
tctagcaaagccaccgcagccaaacctcccgttaaaaaccaaactcctctatccaaacct
gctgccactcctcctaccactacacccaccggctccggagctggtcctagagacaaaacc
accccctccaggcccagcctcccttcctcaggtcccaggacctctgtatcccctggccag
agagctaatgctccagggccaggctctaccccagcagtgcagaaggcccacaggaggcct
gagagcccatgctctagtagtagtagtgaggaggagatccagctggttatcaaacaacca
ggcctggggatgggaatagtccctgctatggcagcacaacccacctggagaggcagggga
agccctaggggtgtggagagaggtgggggtagagggattaggggtagaggggatggaggc
cagagttggggtggtggaggtaggggggttagaggggagtgggacaggggtcctcgtggt
gggggtagaggtggggagtgggacaggggtcctcgtgggggtaaaggagggagaggggaa
gatgcagggttttatttcaactatgaaggtggacagcgacagcagactcctcagccacca
tcgtaccagaaggactccctgaataacagctctgtggtgtttcagaacccatcagagagt
gtccccaagagggactacagtaagatgcccctcctagctgctccccctcaggacggacag
aagatcgccttcaagctgctggagctgacagagaactacacaccagaggtgtctgagtat
aaagaggggaaaatcattcattttgaccacagcaccaaacagattgagctagagctgctc
tctgcttatcaagcgccggtggagccggggaagtttgacctggtgtatcagaacgccgac
ggatccgagagtgtggagtacgctgtgtcccggggctccagggtgactgaacgttgggac
tcactgctggaacccaggctagttgttgggaatttgagctga

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