Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365240
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Entry
139365240 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 4A-like
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139365240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139365240
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139365240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
EF-hand_6
bZIP_2
SPEF2_C
Shugoshin_N
DUF4852
Motif
Other DBs
NCBI-GeneID:
139365240
NCBI-ProteinID:
XP_070958843
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Position
13:63581711..63670831
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AA seq
655 aa
AA seq
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MLLMSQHQPSQSATAPAENSNRNDGEYRTNSNKVRSITTLSDKPNSKMEGNVFPDQEQLL
GFLKKLKEVFDVCDEDADGYIRVEHFVDLGLQFGQGDRDEVKKLTKYLDPNSHGRINFKD
FCYGVFAIKGCEEILKTALGPRSVPIQTDNGYIYQNGEARLGPPIIMCTRPYPDCRVEQG
ECCDMDSTNESGVGSDTSDGGRSNEKEEGLGGLFNNSGQLIGSASASVFSGEEQFEDYGE
GEDVDYTPSSPCPDDDARTNGFSDLGSSLPSSAGQTPLKMCHLYNSDVLDVYCSQCYKKV
NLLNDLEARLNNLRANSPNRKISSTAFGRQLFQHNHSAFSSSQGSTEDLFRDSIDSCDVD
ITEKVSYLEKKVTELENDSLANGDLKCKLKQGNTQLVHRVHELEEQLKDQESRADQTLEE
ETHRHRETYCKMERDKNTDIELLSNRVQQLEEENGEMKLNVCKLKSQTEKLDQEKQRMTD
RLEDTSLRLKDEMDLYRKMMDKLWQNRHEFQKEREAMQELIEDLRRELEHLQLFKLGSEA
GQGAGLSEYNAKTREIEMEHEVKRLKQENFKLRDQNDDLNSQILSLSLYEAKNLFACHTK
AQSLAAEIDNASRDELVDALKEQECVNLRLRQYMDKIILAILDHNPSILEIKSNS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgatgtcacagcaccaaccgagccagtcagcaacggcaccagcggagaacagc
aaccggaatgatggcgaatacagaaccaattcaaacaaagtccgttcaataacgacgtta
tctgacaaaccgaactctaagatggaaggaaacgttttccccgaccaagaacagcttcta
ggcttcctgaaaaagctcaaggaggtattcgacgtgtgtgatgaggatgctgatggttat
attcgggtcgaacattttgtggatttggggcttcagttcgggcagggggacagagatgag
gtgaagaagttgacgaagtacctggatcccaactctcacggcaggatcaacttcaaagac
ttctgctatggggtgttcgccatcaagggatgtgaggagattctgaagacagctctgggt
cctcgtagtgtacccattcagactgacaatggatacatctaccagaacggcgaggcccga
ctgggccctcccatcatcatgtgtacccgtccatacccagactgcagggtggagcagggg
gagtgttgtgacatggacagcaccaatgagagcggcgtgggctctgacacctctgacggg
gggcggagcaacgagaaggaggaggggctaggtggactgttcaacaattctggccagctg
attggctctgcttctgcgtccgtcttctcgggggaggaacagtttgaggactacggagag
ggggaggacgtggactacactcccagcagcccttgccccgacgatgacgctcgcaccaac
ggcttctcagacctcggctcctccctgccctccagtgctggtcagacccctctgaagatg
tgtcacctgtacaacagtgatgtgttggatgtctattgttctcagtgctataagaaggtt
aacctgctcaacgacctggaggccaggctcaacaacctcagagccaacagccccaacaga
aagatatccagcactgcctttggacgtcagttgttccaacacaaccacagtgcttttagc
agcagtcagggaagcacagaggacctgttcagagactccatcgactcttgtgatgtggac
attactgagaaggtgagttacctggagaagaaggtgaccgagctggagaatgacagtctg
gctaatggagacctcaagtgtaaactcaaacagggcaacacacagctagtacacagggtt
catgagctggaggagcagctgaaggatcaggagagcagagcagatcagaccctggaggaa
gagacacatagacacagagagacctactgcaagatggagagagacaagaacacggacata
gagctgctcagtaacagagttcagcagctggaggaggagaatggggagatgaaactgaac
gtgtgtaaactgaagtctcagactgagaaactagaccaggagaagcagcgtatgacagac
cggttagaggacaccagtctgaggctgaaggatgagatggacctctacaggaagatgatg
gacaagctgtggcagaacagacatgaattccagaaggagagagaggccatgcaagagttg
atagaggacctgcgtagggagttggagcacctgcagctgtttaagctgggttcagaggcg
gggcagggggcggggctatcagaatacaacgccaagacacgggaaatagagatggagcat
gaggtcaagagactcaaacaggagaactttaagctgcgggaccagaacgatgacctgaac
agtcagatcctcagtctgagtctgtatgaagctaagaacctgtttgcctgccacaccaag
gcccagtcactggctgctgagatcgacaacgcttctagggacgagttggtggatgctctg
aaggaacaggagtgtgttaacctacgtctgagacagtatatggataaaatcatcctggcc
attctggaccacaacccctctatcctggagatcaagagtaacagttaa
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