Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139365962
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Entry
139365962 CDS
T10872
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139365962
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
139365962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
MS_C
DUF7645
Motif
Other DBs
NCBI-GeneID:
139365962
NCBI-ProteinID:
XP_070959129
LinkDB
All DBs
Position
14:10288926..10291722
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AA seq
271 aa
AA seq
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MHVGYLLDKEGSMYHQGPVRRSGINIPPQNFVPTPQYSDFTGYHHVPNMDTHAQSSGAWG
APYGAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQLPPDNISV
AQLSPDRERRNSSYQWMNKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNTLASIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggataccttttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgttcccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatacgcacgcacagtcttcgggggcttgggga
gctccttatggcgcgccaagagaggactggggcgcctatagtctgggtcctcctaacact
attcctacgcccatgaacaactcatcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaactacctccagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgaacaaaacg
gtacaatcatcttccacgggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gaccaccagagactggagctggagaaggagttccatttcaatcgttacatcactatcaga
agaaagtcggaacttgcggggaaccttggcctttcagaacgacaggtgaagatatggttt
caaaatcgccgagccaaggaaaggaaattaatcaaaaagaaaatgggatctgatggcagc
ggaggatcagtgcacagtgacccgggatcagtgagtcctctgccggtaccaggctcactc
agtccatcggatattcacggctctctctacccaccccccggaatgaacaccttggcatct
attaggaacatacagcaagttactgtcactcagtag
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