Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366010
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Entry
139366010 CDS
T10872
Name
(RefSeq) platelet-derived growth factor C-like
KO
K05450
platelet derived growth factor C/D
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
ocla04540
Gap junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139366010
04020 Calcium signaling pathway
139366010
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139366010
04540 Gap junction
139366010
09142 Cell motility
04810 Regulation of actin cytoskeleton
139366010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139366010
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139366010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
139366010
NCBI-ProteinID:
XP_070959189
LinkDB
All DBs
Position
14:complement(17152915..17221957)
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AA seq
359 aa
AA seq
DB search
MVILNVSSTVFCNRCPPLIQMILPLLILFVSLLQQHGSEAESSHVSKFQQPSLKEQNGVQ
DFQHEKIITVVGEGMIHSPDFPFTYPRSTMLVWRLMASSDNMRIHLSFDERFGLEDSEDG
ICKYDFVEIEEPSENTILGRWCGSQVPASHTSKGSQIRVRFISDEYFPSEPGFSIRYSLL
PMSVLKPEVTPAPSLQSSDALSEAVAGLSTVEEVMKYLEPERWQQDMEDLYKPTWHILGK
SFLHNKKSRGVDLNLLREEVKLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCA
CCSHRCFDCQCVPTRVVNKYHEVLLLKHRSGGRGLQKSMTDVPMEHHEECACVCKDDWD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactaaacgtctcgtcaacagtgttttgtaatcgctgtccgccactaatccaa
atgatccttccattattaatcctgtttgtatcgcttctccaacaacatggctcagaagct
gaatcaagtcatgtcagcaaattccaacaaccaagtttaaaggaacaaaacggtgtccaa
gatttccagcatgagaagataatcacagtcgtaggagagggaatgatccatagtccagac
ttcccatttacctaccccaggagtaccatgctggtctggagactgatggcctccagtgac
aacatgagaatacacttgtccttcgacgagagattcggcctggaagactcagaggacgga
atatgcaagtatgattttgtggagatcgaggagccatctgagaacaccatcctgggccgc
tggtgcgggtcccaggtacccgccagtcacacatccaaaggcagtcagatccgggtgcga
tttatctccgacgagtacttcccctccgagcccggattcagcattcgctactccctgctc
ccaatgagtgtattgaagcccgaggtaactccagctccatctctgcagagctcagatgcg
ttgtctgaggctgtggctggcctcagcaccgtggaggaggtcatgaagtatctggagccc
gagagatggcagcaggacatggaagacctgtacaagcccacttggcacatcctgggaaag
tcattcctacacaacaagaaatccagaggggtggatctcaacctgttgagagaagaggtg
aaactgtacagctgcacgccgcgcaacttctccgtctccctaagggaggagctcaagagg
acggacgccatcttctggcctagctgcctcctggtgaagcgctgcgggggtaactgtgcc
tgctgctcacaccgctgctttgactgccagtgtgtgcccacccgggtagtcaacaagtac
catgaggttctcctgctgaagcaccgaagcgggggccgaggcctgcagaagtccatgacc
gatgtaccaatggaacaccacgaggagtgtgcctgtgtgtgcaaagatgactgggactga
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