Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366067
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Entry
139366067 CDS
T10872
Name
(RefSeq) homeobox protein Nkx-2.5-like
KO
K09345
homeobox protein Nkx-2.5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139366067
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139366067
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
139366067
NCBI-ProteinID:
XP_070959256
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All DBs
Position
14:complement(30327940..30331644)
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AA seq
313 aa
AA seq
DB search
MFSSPSTSTPFSVKDILNLEHHTGAEDLVSLDISPRMDCALPTSCMLARLKQEPLREISS
GSSLFGEELHGVKANRNTDFNFAAAFYGKSFLEMDIKDGKTDSLEGKHRKDMSYISQSEP
GEDLKSEDPDRPAKPRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLAGVLKLTPT
QVKIWFQNRRYKCKRQRQDQSLEMVGIPPPRRISVPVLVRDGKPCLGDSTTYNSSYNVGL
NHFTYNSYPAFSNYPSPGCNMNHACNYPTTAVQSIQPSQNNGNYMNFGVGELNVQNTFPS
GNGVSSLHGIRAW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttttccagccccagtacgtccacacccttctcggttaaggatatattaaacctggag
caccacactggtgctgaggacctggtctcactggacatctctccacggatggactgtgcc
ttaccgacctcctgcatgctggcccgcctgaaacaggagcctctccgggagatatcgtct
ggaagctcgctgtttggagaggagctccatggtgttaaagccaacagaaatactgacttc
aacttcgccgctgccttttatgggaaatctttcttagaaatggatatcaaggatgggaag
acggacagcttggaggggaaacacagaaaagacatgtcctacatctctcagagcgagccg
ggggaggacctgaagtcagaggacccggatcgacccgccaaaccccggaagcgcaggaag
ccgcgcgtgctgttttcacaggcgcaggtgtatgagctggagcgtcgcttcaagcagcag
aagtacttgtcggctccggagagagatcacctggccggggtgctcaaactgacccccaca
caggttaagatctggttccagaaccgccgctacaagtgcaagagacagcgacaggaccag
agtctggagatggttggtatcccgccgccgagacgaatctcagtcccagtgctggtccga
gacgggaagccctgccttggagactcgacgacctataatagttcatataatgtgggcctc
aaccatttcacttataacagttacccagcgttcagtaattatcccagtcctggctgtaat
atgaaccatgcgtgtaactatcccaccactgcggtgcagtctatccaaccctcacaaaac
aacgggaattacatgaacttcggcgtgggagagttaaacgttcaaaacacgtttccgtcc
ggcaatggagtgtcttctttacatggaatcagagcgtggtga
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