Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366070
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Entry
139366070 CDS
T10872
Name
(RefSeq) homeobox protein MSH-D-like
KO
K09341
homeobox protein MSX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139366070
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139366070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
139366070
NCBI-ProteinID:
XP_070959258
LinkDB
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Position
14:30493869..30495673
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AA seq
266 aa
AA seq
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MDSPVDSKDGFSIHEDTPPRRQFKERKTPLSPLPFSVEAIMLDRTHSEGGRRSSGTIISP
LGNYSISVSRQPSSPEYFIPNFDPSSSPVKSETSEPRDCASWISPRCRLSPALNQVNFSL
RKHKTNRKPRTPFTTSQLLSLERKFHHKQYLSIAERAEFSSSLSLSETQVKIWFQNRRAK
AKRLQEADVEKLKIAAAGVGSKPGFYPPGFSSLPFPLCVSLEGLGGGVSGMCGGQGYTFR
HTTLLTTVPHLGVYTSPVGYGLLHLS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggattctccagtagattcgaaagatggcttttcaatccatgaggacactcctccacgg
aggcagtttaaggagcgcaaaacacctttatcacctttacctttcagtgtggaagcgatc
atgttggataggactcacagcgaaggagggagacgcagcagcggtacgataatctctccc
ctggggaattactctatatcggtgtccagacagccgtctagtccagaatactttattccc
aattttgacccgtcttcttcgccagttaaatcagagacgtcggaaccaagggactgtgcg
tcatggatatcaccgcggtgcaggttgtctccagcgctcaaccaggtcaatttctccttg
aggaaacacaagaccaacaggaagccccggaccccattcaccacctcccagctcctgtcc
ctggagaggaagttccatcataaacagtacctgtccatcgctgagcgggctgagttctcc
tcctccctgtccctctcagagacccaggtcaagatctggttccagaaccgacgggctaaa
gccaagagactgcaggaggcagatgtggagaaactcaagattgccgctgcaggtgttgga
tccaagccggggttctatcccccggggttctcctcactgccattccccctctgtgtcagt
ctggagggtctgggtgggggggtctcagggatgtgcggcggacaggggtacaccttcaga
cataccactctgttaacaacagtaccacatctgggggtgtacacctcacctgtagggtac
ggactcctccacctgtcttga
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