Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366115
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Entry
139366115 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139366115
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139366115
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139366115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf_RING_Vps8
Prok-RING_4
zf-C3HC4_4
IBR_1
TerY_C
zf-UDP
Rtf2
zf-Tbcl_FmdE
zf-ANAPC11
DZR
IBR
Motif
Other DBs
NCBI-GeneID:
139366115
NCBI-ProteinID:
XP_070959323
LinkDB
All DBs
Position
14:complement(457246..460790)
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AA seq
192 aa
AA seq
DB search
MSSTTQRKRRTGVPSSSRRTAKSSRVTTTSVRPLAASAAVPETIDVLESSRTESEEEVVD
LTCEGSELTVVDLTNNDSVVVVDEGPHGRREADSESYVLSSDEEEDTNGGLSADLLSSLQ
ASSRARSTPGTVSCPVCMDAYAEIIESGRLVVSTKCGHLFCSHCLRDSLLRSHTCPTCRK
KLTHKQCHPVYI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacaacacagaggaaaagaaggactggagtcccttcaagttccagacgcacg
gccaagagtagcagagtcaccacaaccagtgtgcgacctcttgctgcatcagcagcagtc
ccagagaccattgatgtgctggaaagcagcaggactgagagtgaggaggaggtggtggac
ttgacatgtgaaggttctgagttgactgtggttgacttgaccaacaatgattctgtggtg
gttgtcgatgaagggcctcatggcagacgtgaagctgacagtgagagttatgtactgagc
agtgatgaggaggaggatactaatggaggcctcagtgccgacctcctgtcctctctacag
gccagcagtagagccaggtctactccagggacagtcagctgcccagtgtgtatggacgcc
tatgctgagatcattgaaagtgggaggctagtagtctccacaaaatgtggtcacctgttc
tgcagtcactgcctccgcgactcactgttgagatcccacacttgcccaacctgtagaaag
aaactgacccacaagcaatgccaccccgtatatatttga
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