Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366127
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Entry
139366127 CDS
T10872
Name
(RefSeq) stress-70 protein, mitochondrial
KO
K04043
molecular chaperone DnaK
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139366127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139366127
03110 Chaperones and folding catalysts [BR:
ocla03110
]
139366127
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139366127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139366127
Messenger RNA biogenesis [BR:
ocla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
139366127
Chaperones and folding catalysts [BR:
ocla03110
]
Heat shock proteins
HSP70 / DNAK
139366127
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
139366127
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
139366127
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139366127
Exosomal proteins of breast cancer cells
139366127
Exosomal proteins of colorectal cancer cells
139366127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Thioredoxin_2
Alp7A_like_C
MukF_M
Motif
Other DBs
NCBI-GeneID:
139366127
NCBI-ProteinID:
XP_070959356
LinkDB
All DBs
Position
14:2883777..2898034
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AA seq
684 aa
AA seq
DB search
MLSVARTASRSLPSPNCSISVSSLIKKACWNGFQQDAFRAMSRRDYASEAIKGSVIGIDL
GTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTLYAT
KRLIGRRYDDAEVQKDLKNVPYKIVRASNGDAWVEAHEKLYSPSQVGAFVLMKMKETAEN
YMGHSVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKTQDRII
AVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQHLLTHIVKEFKRESGVDLTK
DSMALQRVREAAEKAKCELSSSLQTDINLPYLTMDASGPKHLNMKMTRSQFEGIVSDLIR
RTVAPCQKAMQDAEVSKGDIGEVLLVGGMSRMPKVQQTVQDLFGRAPSKSVNPDEAVAIG
AAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKGQVFSTAADGQT
QVEIKVCQGEREMAADNKILGQFTLVGIPPAPRGVPQIEVCFDIDANGIVHVSAKDKGTG
REQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRRKDRVEAVNQAEGIVHDTESKMEEFK
DQLPADECNKLKEEITKVRDLLSRKDEETGENIKQAATTLQQASLKLFEIAYKKMAAERE
GSSGNSTGSSSSEGGAGEKKEGQQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtgttgcaagaacagcttcaaggtctctcccctctccgaactgctcaataagc
gtgtcctccttgataaagaaggcttgctggaatggattccaacaagatgctttcagagcg
atgtccagacgtgactatgcatcggaggcgatcaaaggatccgtgattggaattgacctg
ggaactacaaactcctgtgtggcagtcatggagggcaaacaagcaaaggtactggagaat
gcagagggagcaaggacaactccttcagtggtggccttcacagctgatggggagagactg
gtgggcatgccagctaaaagacaggcagtcaccaaccctaacaacaccctctatgccacc
aagcgtctcatcggtcgccgttacgatgacgcagaggttcagaaggacctgaagaacgtg
ccctacaaaattgtccgtgcttccaatggtgatgcctgggtggaggcccacgaaaagcta
tactcccccagccaagtcggtgccttcgtgctgatgaagatgaaggagacggcagagaac
tacatgggtcacagtgtgaagaatgccgttgtcaccgtgccagcctacttcaatgactcc
cagagacaggccacaaaggatgctggtcagattgctgggctgaatgtgctgcgagtcatc
aatgagcccactgctgctgctctggcctatggtttggacaagactcaggacagaatcatc
gcagtctatgacctgggaggtggcacctttgacatctctgtcctggagatccagaagggc
gtgtttgaggtgaagtccaccaacggagacacttttttgggtggagaggactttgaccag
cacctactaacccacattgtgaaggagttcaagcgagagtctggagttgatctgaccaaa
gacagcatggctctgcagcgagtgagggaggcagctgagaaagccaaatgtgaactgtca
tcatccctgcagactgacatcaacctgccctacctgaccatggatgcctctggccccaag
cacttgaacatgaagatgacccgctcccagtttgaaggcatcgtgtctgacctgatccgc
aggacagtggccccctgccagaaggccatgcaggatgcagaggtctccaagggggacatc
ggcgaggtgcttctggtcggtggtatgtctcgtatgcccaaggtccagcagacagtccag
gacctgtttggccgtgcccccagcaagtcagtcaacccagacgaggctgtggccattgga
gctgccatccagggaggtgtgctggctggagatgttactgatgtgctccttctggatgtc
acgcccctgtctcttggtattgagacccttggaggggtgttcaccaaacttatcaacagg
aacacaactattcccaccaagaagggccaggtgttctctacagcagctgatggccagacc
caggtggagatcaaagtatgccagggagaaagagagatggcagcagataacaagatcctg
ggacagttcactctggttggaataccacctgccccacgtggagtacctcagatcgaggtc
tgcttcgacattgacgccaacggaatcgtgcatgtgtctgccaaagacaaaggcacaggc
cgtgaacagcagattgttatccagtcctctggtggcctcagcaaggatgacattgagaac
atggttaagaatgcagagaagtatgccgaggaggacaggaggcgaaaggaccgtgttgag
gctgttaaccaggccgagggcatcgtccatgacactgagtccaagatggaagagttcaag
gatcagctccctgctgatgagtgcaacaaactgaaggaagagattaccaaagtgagagac
ttgctgtcacggaaggacgaagagactggcgagaatatcaaacaggctgccaccaccctc
cagcaggcatcactcaaactctttgaaattgcttacaagaagatggcagcagagcgggaa
ggcagcagtggcaacagcactggatcatcatcgtctgaaggtggagctggagagaagaag
gaaggccagcagtaa
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