KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366152
Entry
139366152         CDS       T10872                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03010  Ribosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    139366152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocla03019]
    139366152
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139366152
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     139366152
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   139366152
  Exosomal proteins of colorectal cancer cells
   139366152
  Exosomal proteins of bladder cancer cells
   139366152
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DSE1_N TRM82_WD Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C ASA1 Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N PAC11 Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Tricorn_2nd Cytochrom_D1 Beta-prop_pof12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 139366152
NCBI-ProteinID: XP_070959407
LinkDB
Position
14:complement(4530247..4533923)
AA seq 317 aa
MTEQMTVRGTLKGHNGWVTQIATTPQFPDMILSASRDKSIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDNINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgactgagcagatgacagtaaggggcaccctgaaggggcacaatggttgggtcacccag
atcgcgactacccctcagtttcccgatatgattctgtctgcatcccgagataagtctatc
attatgtggaagctgactcgtgacgagaccaactatggcatcccccagcgtgccctgaag
ggacactctcactttgtgagtgatgtagtcatctcctcagatggacagtttgccctgtcc
gggtcctgggatgggacgctccgcctgtgggatctcaccactggcaccaccacccgtcgc
tttgtgggccacaccaaggacgtcctgagtgtggctttctctgctgacaaccggcagatc
gtgtctgggtctcgggacaagaccatcaagctgtggaacaccctgggagtctgcaagtac
accatccaggatgagagccactctgagtgggtgtcctgcgtgcgcttttcccccaacagc
agcaaccccatcattgtctcctgtggttgggacaagatggtcaaggtgtggaacctggcc
aactgcaagctgaagactaaccacattggccacactggctacctgaatacagtgacagtc
tctcctgatggctcgctctgcgcttctggtggaaaggacggtcaggccatgctgtgggac
ttgaacgagggcaagcacctgtacaccctagacagtggtgacaacataaatgccctctgc
ttcagccccaaccgctactggctctgtgctgccaccggccccagcatcaagatctgggat
ctggagggcaagatcattgtggatgagctgagacaggaggttatcagcaccaacagtaag
gctgagcccccacagtgcacctctctggcctggtctgctgacggacagaccctgtttgct
ggctacacagataacctgatcagggtgtggcaggttaccatcggaacccgataa

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