Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366166
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Entry
139366166 CDS
T10872
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139366166
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139366166
Enzymes [BR:
ocla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
139366166
Glycosyltransferases [BR:
ocla01003
]
Unclassified
Sulfotransferases
139366166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
139366166
NCBI-ProteinID:
XP_070959440
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All DBs
Position
14:5788875..5804837
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AA seq
895 aa
AA seq
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MLGCVSRLRRLVRLVHHLPLQTSLLLLFLFCTVSVFVSAYFLYGVKRELEPSGGGVAGSE
GASAIYNDLRASPSRLLPVRAVSGGLAGGEGGRGGVRTNPLVLVFVESQYSQLGQEIVAI
LESGRFHYRTEISPGKGDMPTLTDKERGRFTLVIYENILKYVNLDAWNRELLDKYCVEYG
VGIIGFFKANENSLLSAQLKGFPLFLHSNLGLKDCTVNPKSPLLFITRSGQPLPGPLPGD
DWTVFQSNHSTYEPVLLTKTQSAESVPSLGTTATLLPSVVQDLGLHDGIQRVLFGNNLNF
WLHKLVFVDAVGFLSGKRLSLSLERHLLVDIDDIFVGKEGTRMKVKDVKALLETQRALRN
NVPNFTFNLGFSGKFFHAGSDEEDLGDDLLLSYVNEFWWFPHMWSHMQPHLFHNQSVLAE
QMLLNKRFAMEHGIPTNMGYAVAPHHSGVYPVHLQLYDAWKKVWGIKVTSTEEYPHLKPA
RFRRGFIHSGISVLPRQTCGLFTHTIFYKEYPGGPNELDKLINGGELFLTVLLNPISIFM
THLSNYGNDRLGLYTFKSLVAFLQTWTNLRLQTLPPVQLAHRYYNLFPNEKDPLWQDPCE
DKRHKDIWSKEKTCDRFPKLLVIGPQKTGSTALYLFLGMHPDLTSNYPNKETFEEIQFFN
GHNYHRGIDWYMEYFPLPSNTSSDYYFEKSASYFDSEVAAERAATLLPKAKIITILINPA
DRAYSWYQHQRAHDDPVALKYSFHDVITATHDSPVKLRVLQNRCLVPGWYAIHMERWLKH
YHSSQVLVLDGQQLKTEPASVMDRIQKFLGLVNTVNYHNILAFDPKKGFWCQLLEGGKTK
CLGKSKGRRYPDMDPESQSFLREHYRDHNIELSKLLYRMGQPLPSWLREQLIHTR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgctgggatgcgtgtcccgcctgcgtcggctggtccgtctcgtccaccacctccccctc
cagacctccctgctcctcctcttcctcttctgcaccgtcagcgtcttcgtctccgcatac
ttcctgtacggcgtcaaacgggagctcgagccctcaggagggggcgtggctggcagcgag
ggggcgtcggccatctacaatgacctgcgggcgagcccgtctcggctgctcccggtgcgg
gcggtgtcgggggggcttgctgggggcgaggggggcagaggaggggtgaggacaaacccc
ctggtgctggtgtttgtagagagccagtactctcagctgggccaggagatagtcgccatc
ctggagtctggacgtttccactaccggacagagatctctccaggtaaaggggacatgccc
acattaacagataaggagcgtgggcgcttcacgctagtcatctatgagaacattctgaaa
tatgtaaacctggatgcctggaaccgagagctgctggacaagtactgtgtggagtatgga
gtgggcatcatcggcttctttaaggccaatgagaacagcctgctgagtgcccagctcaaa
ggattccccctcttcctccattccaacctgggcctgaaggactgcacggtcaatcccaag
tcccccctcctcttcatcacacgctccggccagcccctccccggccccctgcccggggac
gactggaccgtcttccagtccaaccactccacctacgagcccgtgctcctgaccaagacc
cagtccgccgagagtgtcccctcgctcggtacgacagccacgctgctcccctccgttgtg
caggacctgggtctccacgacggcatccagagggttctgtttgggaacaacctcaacttc
tggctgcacaagctggtgtttgtggacgcggtgggcttcctgtcggggaagaggctgtct
ctctccctggagcgacatctactggtcgatatagatgacatatttgtggggaaggagggg
acccggatgaaggtgaaggatgtcaaggccctgttggagacccagagagcgctgcgtaac
aatgttcccaacttcaccttcaacctgggcttctcagggaagttcttccatgcagggtca
gatgaggaggacctgggggatgatctgctcctctcctacgtcaatgagttctggtggttc
ccccacatgtggagccacatgcagccccacctcttccacaaccagtcagtgctagccgaa
cagatgcttctcaacaagaggttcgctatggagcacggtatccccactaacatgggctat
gcggtagccccccaccactcaggtgtgtacccagttcacctgcagctgtacgatgcctgg
aagaaggtgtggggcatcaaggtgaccagcacggaggagtacccccacctcaaacctgcc
cgtttcagacggggattcatacacagcggtatcagcgtcttgcccagacagacgtgtggt
ctgttcacacacaccatattctataaggagtacccaggcggacccaacgagctggacaaa
ctcatcaacggaggagagctgttcctcactgtcctactcaacccgatcagtattttcatg
acccacctgtctaactacggtaacgaccggctgggcctttacaccttcaaaagcctggtg
gccttcctgcagacgtggaccaatctgcggctacagaccttgcctcccgtccagctggcc
cacagatactataacctcttccctaacgagaaagacccactctggcaggatccctgcgag
gacaaaaggcacaaggacatctggtcaaaggagaaaacgtgtgaccgcttccccaagctg
cttgtcattgggcctcagaagacaggttctacagccctctatctgttcctgggcatgcac
cctgacctgaccagtaactaccccaacaaggagacctttgaggagatccagttcttcaat
ggacacaactaccacagaggcatcgactggtacatggagtacttccccctgccctccaac
accagctcagactactactttgagaaaagtgccagctactttgactccgaggtggcagcg
gagcgggcggccaccctcctgcccaaggccaagatcatcaccatcctcatcaacccagcc
gaccgcgcttactcctggtaccagcaccagcgtgcccatgatgacccggtggctctgaag
tactccttccatgatgtcatcacggctacccatgattccccggtaaaactgcgtgtgctc
cagaaccgctgtctggtgccaggctggtacgccatccacatggagcgctggctcaaacac
taccactccagccaggtcctggttctggacgggcagcagctgaagactgagccggcctca
gtcatggacaggatccagaagtttctgggcctggtcaacaccgtcaactaccacaatatc
ctagcgtttgaccccaagaaaggcttctggtgtcagctgctggagggagggaagaccaag
tgtctggggaagagcaaggggcgtaggtaccctgacatggacccggagtcccagtcgttc
ctcagggagcactacagggatcacaacatagagctgtctaagctgctgtacagaatgggc
cagcccctgcccagctggctccgagagcaactgatccataccaggtag
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