Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366171
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Entry
139366171 CDS
T10872
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139366171
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139366171
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139366171
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139366171
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139366171
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
139366171
CD molecules [BR:
ocla04090
]
Proteins
139366171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
VEGFR1-3_N_Ig-like
I-set
Ig_PDGFR_d4
Ig_2
ig
Ig_VEGFR-1-like_5th
C2-set_2
Motif
Other DBs
NCBI-GeneID:
139366171
NCBI-ProteinID:
XP_070959448
LinkDB
All DBs
Position
14:complement(5834726..5855453)
Genome browser
AA seq
985 aa
AA seq
DB search
MELYLAFLLGILPTAAQEWRRPVIKLNSEVVVGSEVVLNPGTPLVLRCEGDGPVNWLTRL
SKHKSLISKGNGRVRTFKVDRPSAEHTGTYKCEYTSVNVKVRDLFSTVHVYVKDPDSLFW
TSSASLRVVRKEGEDHLLPCLLTDPEATDLGLRMDNCTSVPPGMNYTADPRRGILIRNLH
PSYNADYVCSAKLHGVERTSKTFNLNIIQRLRFPPYVFLEKDEYVHIVGEKLSIHCTTHN
PNFNYNVTWNYSSKKRFTIEQKVQSVDSNRLDIESILTIPVVDQSDTGNITCIGTNEAGV
NKSTTSLMVVEEAYIRLSPQLSSKLAHQGLSIDVNEGEDLKLSVLIEAYPQIIGQHWATP
TASSTQEQTFTRYNNRYSATLLLKRMIAQEQGQYTFYAKSSMANASITFQIQMYQRPVAV
VRWENITTLTCTSFGYPAPIILWYQCSGIRTTCNENATGLQMPAPLLAQTVEVQREEYGV
VEVQSVLTMEPSSHRMTVECVAFNLVGVGKDTFAMDVSNIMFTSTLLGAAGVLALLLLLL
MVLLYKYKQKPRYEIRWKIIQASEGNNYTFIDPTQMPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGEDDNAVRVAVKMLKARAHSDEREALMSELKILSHLGQHKNIVNLLGAC
TQAGPVLVITEYCSHGDLLNFLRHKQETFLNFVMNIPAVPEETSDYKNLCEGKQFIRSDS
GISSVCSDSYLEMRPGPQPVNSSLDSVCEDGGPDSWPLDMEDLLRFSYQVAQGLDFLAAK
NCIHRDVAARNVLLTDLHVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCLY
TVQSDVWSYGILLWEIFSLGKSPYPSILVDTKFYNMIKCGYQMSRPDFAPPEMYTIMKMC
WNLEPTERPTFSKISQLIERLLGEEPERPDQQHQNIQLQQDMMVEELELCDDNDEPKCCD
GSCDQSCEHEEEEQPLVKTNNYQFC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtacctggccttccttctggggatcctgcccactgcagctcaagaatggcga
cgtcctgtgatcaagctaaactcagaggtcgtggttgggtctgaagtagtactgaaccct
ggcaccccattggtcctgaggtgtgagggggatggtccagtcaactggctgacccggttg
tccaaacacaagagcttaatctccaagggcaatgggagagtcagaaccttcaaggtggac
cgcccctctgcagaacacactgggacatataaatgtgaatataccagtgtgaacgtcaag
gttcgggacttgttctctacggtgcatgtgtatgtgaaagacccagacagcctgttttgg
accagcagcgcgtccctgcgtgtggtgaggaaggagggggaggaccacctgctcccctgc
ctgctgaccgacccagaggccacagacttggggctccgcatggacaactgtacctccgtg
cccccagggatgaactacacagcagacccccgcagaggcattctcatccgcaacctccac
cccagctacaatgctgactatgtctgcagcgccaaactccacggggtggagaggacttcc
aagactttcaacctcaacatcatccaaaggctgcgtttcccaccttatgtattcctggaa
aaggatgagtatgttcatatcgtgggcgagaagctgagcatccactgcaccacacacaac
cccaacttcaactataatgtcacgtggaattacagctccaaaaagagatttacaatagag
cagaaagtccaatcagttgacagtaaccgtctggacattgaaagcatcctgaccatccct
gtagtggaccagtcagacacaggcaacattacctgcatcggcaccaacgaggctggagtc
aacaaatctaccacctccctgatggttgtagaggaggcctacatccgtctttctccccag
ctgtcctccaagctggctcaccagggcctgtccattgacgtgaacgagggggaagacctg
aaactcagtgtcctgatcgaggcgtaccctcagatcataggccagcactgggccacccct
acagcctcctccacgcaggaacaaacctttacacgctataacaacaggtattccgctacc
ctgctgctcaagaggatgattgcacaggagcagggccagtacaccttttatgccaagagt
tccatggccaacgcatccattacattccaaatccaaatgtatcagaggccggttgccgtg
gtgagatgggagaacatcaccaccctcacgtgcacgtcgttcggttaccctgctcccata
atcctctggtaccagtgctctggaatccgaaccacgtgcaatgagaacgcaacaggtctc
cagatgcctgctcctctcttggcccaaacagtcgaggtccagagggaggagtatggagtg
gtcgaggtccagagcgtcctgacaatggaaccgtccagccataggatgaccgtggagtgt
gtcgccttcaacctggtcggagtcggtaaagacaccttcgccatggacgtttccaatata
atgttcacctccactctattgggagcagctggtgtgctggcccttctcctcctgctactc
atggtcctgctctacaagtacaaacagaaaccgagatatgagatccggtggaagatcatc
caggccagtgaaggaaacaactacacctttatcgacccaactcagatgccgtacaatgag
aagtgggagtttcccagggacaagctcaagctaggaaagatcctaggagccggggccttt
gggaaggtggtggaggccacagcctatggtctgggggaggacgacaacgcggtgcgagtg
gctgtaaagatgctcaaagccagggcccactcagatgagagagaggctttgatgtcagaa
ctgaagattctgagtcacctgggacagcacaagaacattgtcaacctcctgggagcctgc
actcaggcgggacctgtactggtgatcactgagtactgtagtcatggcgaccttctgaac
ttcctgcgacacaagcaggagaccttcctgaactttgtcatgaacataccagcggtacca
gaggagaccagtgactacaagaacctctgtgaagggaaacagttcatcagaagtgacagt
gggatatccagtgtgtgttctgacagctacctggagatgaggcctggtccccagcctgtc
aactcctctctggactctgtgtgtgaggatggtgggccggactcgtggccgttggacatg
gaggacctgctgagattctcctaccaggtggctcagggcctggacttccttgcagccaag
aactgtattcaccgggacgtggcagctcggaacgtcctcctgacagacctccatgtggct
aagatctgtgacttcggcctggcacgtgacatcatgaatgactccaactatgtggtgaag
ggcaatgcgcgtctgccagtgaagtggatggctccagagagtatctttgactgtctctac
actgtccagagtgacgtctggtcctatgggatcctgctatgggagatcttctctctagga
aagagtccctaccccagtatcctggtggatactaaattctacaacatgatcaagtgtggt
tatcagatgtctcgaccagactttgcacctccagagatgtatacaatcatgaaaatgtgc
tggaatctggagccaacagagcgaccgaccttcagcaagatcagccagctgattgagaga
ttactgggtgaggagccagaacgtccagatcagcagcaccagaacatccagctgcagcag
gacatgatggtcgaggagttggagctgtgtgatgataatgatgagcctaagtgttgtgac
ggctcctgtgaccagtcgtgtgagcacgaagaagaggagcaaccactggtgaagaccaat
aactatcagttctgctga
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