KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366195
Entry
139366195         CDS       T10872                                 
Name
(RefSeq) F-box and WD repeat domain-containing 11-A-like isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04114  Oocyte meiosis
ocla04120  Ubiquitin mediated proteolysis
ocla04218  Cellular senescence
ocla04310  Wnt signaling pathway
ocla04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139366195
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    139366195
   04340 Hedgehog signaling pathway
    139366195
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    139366195
   04218 Cellular senescence
    139366195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139366195
   03036 Chromosome and associated proteins [BR:ocla03036]
    139366195
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     139366195
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     139366195
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-TrCP_D Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_IP5PC_F WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_DCAF4 NBCH_WD40 WD40_like Beta-prop_IFT140_1st F-box Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513
Other DBs
NCBI-GeneID: 139366195
NCBI-ProteinID: XP_070959516
LinkDB
Position
14:complement(7583288..7604138)
AA seq 564 aa
MEPEIEDKTLELMCSVPRSLWLGCSSVAESLCALGCLQSIPSTRAHNQNTSVMESQNHVD
DLSPKKTTVLTKLSNGPVMTGSRKRPSEGNNDKEKEHCISLFDQWSETDQVEFVEHLISR
MCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDAQSLCSAELVCKEWQRVI
SEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTEVPPNSYYHSLYPKIIQDIET
IEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTG
HTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVLNTLIHHNEAVLHLRFCNGLMVTCSK
DRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT
LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS
GAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD
FLNVSTNGQSEGRSPSRTYTYISR
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggaaccggagattgaggacaaaacgttggaattaatgtgctctgtgcctcgctctctc
tggctgggctgctcctcggtggcagagagtttgtgtgcactcgggtgcctgcagagcatc
ccctccacccgggcacacaaccagaacacatcagtcatggagtctcagaaccacgtagac
gacctctcgccaaagaagaccacagttctcaccaagcttagtaacggtcctgtgatgacg
ggctctcgtaagcgcccgtcggaggggaacaacgacaaggagaaggagcactgcatctcc
ctgtttgaccagtggtccgagactgaccaagttgagtttgtagaacacctcatctcccga
atgtgccactaccaacacggccacatcaactcctacctcaaacccatgctccaacgagac
ttcatcacagcactgccagcccagggtctggaccacatagcagagaacatcttgtcgttc
ctggacgcgcagtctctgtgctccgcggagctggtgtgtaaggagtggcagagggtgatc
tcagagggcatgctctggaagaaactcatagaacgcatggtccgcacagaccccctctgg
aaaggcctgtccgagaggcaccagtgggagaagtatctgttcaagaaccgaacgacagag
gtcccgcccaactcctactaccactccctgtaccccaagatcatccaggacatagagact
atcgaggctaactggcggtgtggcagacacaacctacagaggatccagtgtcggtcagag
aacagtaaaggagtctactgcctccagtacgacgacgataaaatcatcagcggcctgaga
gacaactccataaagatctgggacaagcagtctctggagtgtctgaagatcctgacaggt
catacagggtcagtgttgtgtctgcagtatgatgagagagtcatagtcactggttcctcc
gactccactgtcagggtgtgggacgtgacgtcgggtgaggtattgaacaccctgatccat
cacaacgaggcggtgctccacctgcgcttctgcaacggtctgatggtgacttgttccaag
gaccgctccatcgccgtgtgggacatggcctcgcccaccgacatcagcctccggcgggtc
ctcgtgggtcaccgtgccgccgtcaacgtggtcgattttgacgacaaatacattgtgtcc
gcttcgggggaccgcaccatcaaggtgtggagcaccagtacgtgtgagtttgtgcgcacg
ctaaacggacacaagcgaggcatcgcctgcctgcagtacagagacagactggtggtcagt
ggctcctcggacaacaccatacggttatgggatattgagtgtggagcgtgtttgcgagtg
ttggaaggtcatgaggaactagtccgctgcattcgctttgacaacaagaggattgtcagt
ggtgcctatgacggtaagatcaaggtgtgggacctgcaagctgccctggacccacgagcc
ccagccagcaccttgtgtctgcgcacactggtggagcactcggggcgcgtgttccggctg
cagtttgacgagttccagatcatcagcagttcccatgacgacaccatcctcatctgggac
ttcctgaacgtgtcgaccaatggacagtcagagggccggtccccctcacgcacctacacc
tatatctccagatag

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