Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366197
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Entry
139366197 CDS
T10872
Name
(RefSeq) testican-1
KO
K08136
testican
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139366197
Proteoglycans [BR:
ocla00535
]
Extracellular matrix (ECM) proteoglycans
Others
139366197
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
139366197
NCBI-ProteinID:
XP_070959520
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Position
14:complement(7622416..7892832)
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AA seq
470 aa
AA seq
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MLFCLLPFAALLLRAEGRRGGTVVGNKNIGHALDNDKWLSTVSQYDKDRYWNKFRDDDYF
KSYGPAKPINQETEARPSRHGEPGTKAHSNPGKRRTEEAPDATKDPCLKVRCPAHKVCFS
HDYQTAICTNTNHKQSRHSVKPRKERLAHKHWAGAGAHGKCGPCPVIHPSPVCGSDGHTY
SSKCKLEFQACTSGKSIALKCEGPCPCLPGQELVKPHRDKTEKTVCSDGDLHSLASRLKD
WFGVLHLDANRDLKASANSDSAAGRFDTSILPICKDSLGWMFNKLDMNYDLLLDQSELSA
IYLDKYELCMKPLFNSCDSFKDGKLSNNEWCYCFQKPDGLPCQNEMNRIQTQGRRKSLIG
AYIPRCSEEGYFKSTQCHGSTGQCWCVDKYGNEIAGSRKQGNPTCEEDQETSGDFGSGGG
VLLLDDQEEEPPRSGRSRQKQRRGRIHPRGAIEDDEDEEDDKDDEIGYVW
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctgtctgctgcctttcgcggctctcttgctgcgcgcagagggcaggcgcggg
ggaacggtggttggtaacaaaaacattggccacgcgttggacaacgacaaatggctcagc
accgtgtctcaatacgacaaggacagatattggaacaaattcagagatgatgactacttc
aaaagctatggtcctgccaagccaatcaaccaagagacagaggcgaggcccagcagacat
ggggaaccaggaaccaaagcccactccaacccaggaaagaggagaacagaagaggctccg
gacgccactaaagacccgtgtctgaaggtgcgctgccctgctcacaaggtgtgtttcagc
cacgactaccagacagccatctgcaccaacaccaaccacaagcagtctagacacagtgtg
aaacccagaaaagaaagattggcccacaaacactgggcaggagcaggggcccatgggaag
tgtggtccgtgccctgtcatccaccccagccccgtgtgcggctctgacggccacacctac
tcctctaagtgtaagctggagttccaggcatgcacatcagggaagagcatcgctctgaag
tgtgagggaccgtgcccatgtctgcctggtcaggaactggtcaaaccacacagagacaag
acagagaagaccgtctgcagtgatggggacctgcatagcctagcatccagactgaaggac
tggtttggagttctccacctcgatgccaaccgagacctcaaagcctctgccaactctgat
tcagcggcaggacgttttgacaccagtatcctgcccatctgtaaggactctctgggttgg
atgttcaacaagctggacatgaactatgacctcctgctggaccaatcagagctcagtgcc
atctacctggataagtatgagctgtgtatgaagcccctgttcaactcctgcgactccttc
aaggacgggaaactgtccaacaacgagtggtgctactgcttccagaaacctgacggtctg
ccctgccagaatgagatgaacaggattcagactcagggtcgacggaagagtctcataggg
gcctatattccacgctgttctgaggagggttactttaagtcaacccagtgtcatggcagt
actggacagtgttggtgtgtggacaaatacggcaacgagatcgccggctccagaaaacag
ggcaaccccacctgtgaggaggatcaagagacctcgggggattttggcagcgggggtggc
gtccttctccttgacgaccaggaggaggagccacctcggagtgggaggagccggcagaag
cagaggcggggccggatccatcccagaggggccatcgaggatgacgaggacgaggaagat
gacaaagatgacgagattggctacgtctggtag
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