KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366210
Entry
139366210         CDS       T10872                                 
Name
(RefSeq) pre-mRNA-processing factor 19-like
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
ocla04120  Ubiquitin mediated proteolysis
Brite
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139366210
Spliceosome [BR:ocla03041]
 Complex B
  Other components
   Prp19 complex
    139366210
 Complex C
   Prp19-CDC5 complex
    139366210
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  U-box type E3
   139366210
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    139366210
SSDB
Other DBs
NCBI-GeneID: 139366210
NCBI-ProteinID: XP_070959537
LinkDB
Position
14:complement(8219472..8224196)
AA seq 505 aa
MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGVDPMNSQPLSEEQLIDIKVSHP
IRPKAPSSTSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLVAPQSMPASQPAAGGAGGEPMEVSVQVGMTPEIIQKLQDK
ATVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASVPGILCMDLCPSDTNKVLT
GGADKNVVVFDKKEEQIIATLKGHTKKVTSVIYHPSQSVVFSASPDSTIRVWSVTGGNCI
QVVRAHEASVTGLSLHATGDYLLSSSEDQYWAFSDIQTGQVLTKVTDEAAGVALTCAQFH
PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSVKLW
DLRKLKNFKTIALDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGLVT
GLAFGDNAQFLSSAGMDRSLKFYSL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctttggtttgcgcaatttccaatgaggtccccgagcacccttgcgtgtccccggtg
tctaaccaggtgttcgagcgccgactgatcgagaagtatatcgcagagaatggagtggat
cccatgaatagccaaccactgtcggaggagcaacttatcgatataaaagtgtctcatcct
atccgaccaaaggctccctcttctaccagtatccctgccatactcaaggctctgcaagat
gagtgggatgcggtcatgttgcacagcttcactctgaggcagcagctgcagacgactcgc
caggagctctctcacgccctctaccagcatgatgcagcctgcagagtcattgctcgtctt
accaaggaggtcactgcagccagagaggccctggccacactcaagccccaagccggattg
gtggcccctcagtctatgcccgcctctcagccagccgctgggggtgctggtggggaacca
atggaggttagtgtgcaggtgggaatgactccagagatcatccagaagcttcaagataag
gctactgtccttaccacagagcgaaagaagagaggaaagaccgtgccagaggagctggtc
agggctgaggatctgagcaagtaccgccaagtggcttcccacgctggacttcacagtgcc
agtgtcccaggaatcctgtgtatggacctctgtccttcagacaccaacaaagtactcact
ggtggggctgataagaatgtggtggtatttgataagaaggaggagcagatcattgccacc
ctcaagggtcacaccaagaaggtcacctctgtcatctaccacccctcccagtctgtggtg
ttctctgcctctccagacagcaccatccgggtgtggtctgtgactgggggcaactgtatc
caggtggtgcgagctcacgaggcgagtgtgaccgggctgtcacttcacgcaaccggggac
taccttctcagctcttccgaagaccagtactgggccttctcggatatccaaactggccaa
gtccttaccaaagtcacagatgaggctgctggtgttgctctgacttgtgctcagttccac
cccgacggtctgatcttcgggacgggaaccgccgactcccagatcaagatctgggatctg
aaggagcgcacaaacgtggccaacttcccaggccactctggccctgtcacttccatcgcc
ttctctgagaacgggtactacctggctacaggtgcccaggacagctctgtgaagctgtgg
gatctgaggaaactgaagaacttcaagaccatcgccctggacaacaactatgaggttaag
tctctggtgtttgatcagagtggtacgtacttggctgtgggtggatccgacatcagggtg
tacatctgcaagcagtggtcggaggtcctcaacttcagcgaccattctggcctggtgaca
gggctggcattcggagacaatgctcaattcctttcctccgctggaatggacagaagcctc
aagttctacagcctgtag

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