Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366228
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Entry
139366228 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04518
Integrin signaling
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
139366228
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139366228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139366228
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139366228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_9
SH3_1
RhoGEF67_u1
PH
CENP-Q
HAUS-augmin3
IcsB_M
Motif
Other DBs
NCBI-GeneID:
139366228
NCBI-ProteinID:
XP_070959573
LinkDB
All DBs
Position
14:complement(9001213..9034078)
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AA seq
772 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGSVPKYCQDP
RNEADCIANIKEFLRGCTSLKVEGFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
QSGTSAPSQSTSSHTLSSSKSLRRPSKPVEMSENGGGGLLLVKARFQFKQNNEDELSFNK
GDLIGVSRQEEGGWWEGTLNGKTGWFPSNYVREVKPCDKPVSPKATQLTKNYYSVVVQDI
QEHEREFVKELQTVLSSYLRPLLASDKLSVTDSGILGANLEEILTFQQGLVMALEECTKV
PESQQRVAACYLNLIGQIRMLYLSYCSSHPSAVCVLTDHSEELGTFMESQGASTPGILTL
TTSLSKPFMRLDKYPVLLQELERHVEEAHPDYSDILKATVAFKSLVTQCQDLRKRKNLEL
QILSEPVRGWEGDGMKSLGHVAYMSQVHMQNGTNEEKEERYLMMFPSVLVMLSASPRMSG
FIYQGRLPLTGSTVSRQTDDTENGHYAFDITGSMFDRVTVICSNPQELQDWLDHLNTYTK
GGSPVGTIIRNEGGKPLSMVGTPTHQSHLPIFITPSQANRGPLEPPKTTKPWSLSCLRPA
PPLKPSAALGYKERMSYILKDSGKSPRPIKKFLPKRKTERKPSDDEFLLRKSTAALEEDA
QILKVIESYCTGASLHQNNTAVRKDSVPQVLLPEEEKMMVEEMKNNGQTIIEEKSLVDAV
YALKDEVHELKKESKWIKQCLEDEQKSRKELERVVRKLAKQKNDCAWEDGDH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagagcagacggttacgtggctgatatcattaggggtacttaattcaccc
aagaagaacatagctgacccagaggaatttctgaaaacatctctgaaagatggggtcgtc
ctgtgcaaacttatggagcggctcgtgcccggctctgttccaaagtactgtcaggatccg
agaaacgaagccgactgcatcgctaatatcaaggagtttttgagaggatgtacatccttg
aaagtagagggatttgaaccagagtgcctgtacactggggagaactttaacaaagtgctg
accactctgctgggagtcaactttgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacatccgctcctagtcagtccacctcttcccacacactatcctcatccaag
tccctgcgcagaccatccaaaccagtggagatgtcggagaacggcgggggcgggctgctg
ctggtgaaggcgcgcttccaattcaagcagaataacgaggatgagctgtccttcaacaag
ggagacctgatcggtgtgtcgcgccaggaggagggcggctggtgggagggcacgctcaac
ggcaagacgggctggttccccagcaactatgtccgtgaggtcaagccctgcgataagcct
gtgtctcctaaagccactcaacttaccaagaactactacagtgtggtggtgcaagacatc
caggagcatgagcgggagtttgtcaaggagctgcagacagtcttgagctcttacctacga
cctctactggcaagcgacaagctgagtgttacagacagtggcattctgggcgctaacctg
gaggagatcctcaccttccagcagggcctggttatggctctggaggagtgtaccaaggtt
ccagagagccagcagcgagtggctgcctgctacctcaacctgattgggcagatcaggatg
ctgtacctgtcctactgctccagtcacccttcagctgtctgcgtactcactgaccacagt
gaggagctgggtacgtttatggagagccagggggccagtacgccaggcatcctgaccctg
accaccagcctgagtaaacccttcatgaggctggacaagtaccctgtcctgctgcaggag
ctggagagacacgtggaggaggcccacccggactacagtgacatcttgaaggcaacggtg
gcctttaagagcttggtgacccagtgtcaggacctgcggaagcgtaagaacctggaacta
cagatcctgtcagagccagtgagaggctgggagggagacggaatgaagtctctgggtcac
gtggcctacatgtcccaggtgcacatgcagaatgggaccaatgaggagaaagaggagcgc
tatctcatgatgtttcccagtgtgctcgtcatgctgtctgctagtccgcggatgagcggc
ttcatataccagggaaggctgccactgacgggctccacggtctccagacagacagacgac
acagagaacggccactatgcctttgatatcacagggagcatgtttgatcgtgtcacagtg
atctgcagtaacccccaggaactgcaggactggctggaccatctcaatacctacaccaaa
ggtggaagccctgtgggcaccataatcaggaacgagggggggaaaccactcagtatggtg
ggcactcccactcaccagtcccacctgcccatcttcatcacccccagccaggccaaccgg
ggaccactggagccccccaagaccaccaaaccctggtccctgagctgcctgcgtcctgcc
ccgcccctcaagccctctgctgcactgggctacaaggagagaatgtcttatatattgaag
gactccggtaaaagtccgaggcccattaagaagttcctcccgaaacgcaaaacggaacga
aaaccttccgacgatgagttcctcctgcggaaaagtacagctgctctggaggaggatgca
cagattctgaaggtgatcgagtcctactgcacaggggccagcctgcatcagaacaacacg
gcggtgaggaaagattctgtccctcaggtcctgctgccggaggaagagaagatgatggtg
gaagagatgaagaacaatggtcagaccatcatagaggagaagagtctggttgatgcggtg
tacgctttaaaggatgaggtccatgaattaaagaaggagagtaagtggatcaagcaatgt
ctggaggatgagcagaagtctcgtaaggagctggagagagtggtcaggaagctggccaag
cagaagaacgactgtgcctgggaggatggagaccactga
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