Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366288
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Entry
139366288 CDS
T10872
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
139366288
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
139366288
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SSDB
Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
139366288
NCBI-ProteinID:
XP_070959697
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Position
14:complement(12540006..12566961)
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AA seq
705 aa
AA seq
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MGDTLEFNEIYHESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSVATWRRVCLGH
GIKLATSSGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAQNVRSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPSKDQRQMFFVISLDPPIKQGQTRYHFLILHFSKEEELKLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISSVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLHIKNRGFKEKAKNNEYSDSDDDQHDAYLERMKAEGKIREEGDGSNDSDEETDESF
NPGEESDVAEEYDSNASESDSGSGGDGSGDEGKKKPAKKAKVVKEKRERKPRKGKKQKDT
NAPKRPMSSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKEDKEEWDGKAEEAK
KTYEKAMKEYRESGGGSSTPAKKESKKEDKKRKSGGGEKEKEQGGNDSFKSREFISSEES
SSDGERKKAKKAKKAKGTPQSRDKESEEEKEEAMTTPPSSEEDSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagttcaacgagatctaccatgaatccaaggggtcctggaacgac
ggtcgtctgcggttcagtaagcagaatgtggtgtataagagcagtaagaccgggaaggtg
gacaacatcccggcagcagagctgtctgtggccacatggaggcgtgtgtgtctgggacac
ggcatcaaactggcaaccagcagcggccatgtctacaaatacgacggcttcagagacacg
gattatgagaggatctctgagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgcgtgaagggctggaactggggcactgctaaattctctggtccattgttgtcg
tttgacgtgaatgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
accgggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccgggcccgcagacgagggggcagaccccgtggag
gcgtttgcccagaacgtgcggtctaaggcagatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
ccggccttcctgcacctccatggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctcttcctgctaccaagcaaggaccagagacagatgttcttcgttatcagtctg
gacccgcccattaagcagggacagacgcgttaccacttcctcatcctgcacttctctaag
gaggaggagctcaaacttaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagcaagaacatgtcaggctctctctatgagatggtcagcagggtgatgaag
gctctggtcaacaggaagatcactgtgcccggaaacttccagggcaacacccctggggcc
cagtgtataacatgttcctacaaggctcagtccggcctgctctacccgctggagcggggg
ttcatctacgtccacaagcccccagttcacctgcgcttcgaggagatctccagtgtcaac
ttcgccagaggcaccaccaccacgcgctccttcgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatagagagggaagagtacgggaagctgtttgactttgtc
aacgccaagaaactccacatcaagaaccgaggattcaaggagaaggctaagaacaacgag
tacagtgactcagacgacgatcagcacgatgcctacctggagaggatgaaagccgagggc
aagatcagagaggagggagacggcagcaacgactcagacgaagagaccgatgagtctttc
aaccctggagaggagagtgatgtcgctgaggagtatgacagtaacgcgtcggagagcgac
agcggcagcggaggggatggcagcggtgatgagggaaagaagaaacctgcaaagaaggcc
aaagtcgtgaaagagaagagggagaggaaaccacgcaaagggaagaagcagaaggacacg
aacgcccccaagaggccgatgagttcctacatgctgtggctcaactccagccgcgagcgc
atcaagtctgaaaaccccggaatctccatcacagagatctccaagaaggcaggagagatg
tggaaacagatcgggaaggaggacaaagaggaatgggatgggaaggcagaggaggctaaa
aagacctatgagaaagccatgaaggaatacagagagagtggtggaggctcctccacacca
gccaagaaggagagcaagaaggaggacaagaagaggaagtctggtggaggagagaaagaa
aaggagcaaggagggaacgacagctttaagagccgagagtttatctccagcgaggagagt
tcatctgacggtgaacgcaagaaggccaagaaagccaagaaggccaaaggcacaccccag
agcagggacaaggagtctgaggaggaaaaagaggaagcgatgaccacaccccccagctct
gaagaggactctgactga
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