Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366321
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Entry
139366321 CDS
T10872
Name
(RefSeq) polycomb group RING finger protein 3-like
KO
K11488
polycomb group RING finger protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139366321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139366321
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
139366321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
DUF3337
zf-Nse
TRAF3_RING
GAGA
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
139366321
NCBI-ProteinID:
XP_070959779
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All DBs
Position
14:complement(13712416..13752165)
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AA seq
249 aa
AA seq
DB search
MAALGNPETLTRKIKLWDINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQRDFYQKLGMEVPGDIKGEL
CSMKHLDPQRNGEVKTENTDKKETAEEKPEEDNDYHRSDEQVSICLECNSSKLRDLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattagggaaccctgagacgctaaccaggaagatcaagttgtgggacatcaac
gcccacatcacttgtcgcctgtgtgaggggtacctgatagatgccactactgtcacggag
tgcttacacactttctgcagaagctgtctagtgaagtaccttgaggagaacaacacctgt
cccacgtgcaggattgtcattcaccagagccatccactgcagtacatcggccatgaccgg
acaatgcaagacattgtctacaagttggtgccggggttacaagaggcggagataaaaaaa
caaagagacttctatcagaagctgggaatggaagtgcccggggacatcaaaggagagctg
tgcagcatgaaacatctagatcctcaacgcaatggcgaggtgaaaacagagaacacagac
aaaaaggaaacggcggaggagaaaccggaggaggataacgattatcaccgcagcgacgag
caggtcagcatctgtttggagtgcaacagcagcaagctccgcgacctgaagcgcaagtgg
atccgctgctcggctcaagccacggtccttcacctcaagaaattcatcgccaaaaagctt
aacctgacatcgtttaatgagctggacattttatgcaatgaggaaatcttggggaaggac
cacactttgaaattcgttgtcgtgacgagatggagatttaagaaatcccccctcctgctg
cattacaggcccaaaatggatttgctgtag
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integrated database retrieval system
