Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366359
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Entry
139366359 CDS
T10872
Name
(RefSeq) glycine receptor, beta b isoform X1
KO
K05196
glycine receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139366359
04082 Neuroactive ligand signaling
139366359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139366359
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139366359
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139366359
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Glycine
139366359
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139366359
NCBI-ProteinID:
XP_070959842
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Position
14:17248092..17275151
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AA seq
502 aa
AA seq
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MAQGLTKMGVKKLAILLLVFLVWIEGGSTKEKGTKKGKKGKQVYCPSQLTPEDLARVPEN
STSNILNRLLITYDPRIRPNFKGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQRWNDP
RLRLPRDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVLISM
RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSGDPVQMEEIALPQFDIKQ
EDIEYGNCTKFYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDAS
AARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVMLN
SPKRIEAEKAKMASKVKAEGKEKAAGKNNTVNGTSETPCHVSTLQGAETRCKKVCTSKSD
LRTNDFSIVGSLPRDFELSNFDCYGKPITLPHGLSKSQAKAKKPPPPKPIIPSAAKRVDL
YARALFPFSFLFFNVIYWSVYL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggggttgaccaagatgggcgtcaagaagctggccatccttctcctcgtcttc
ttggtctggatagagggaggatccactaaagaaaaggggacaaagaaagggaagaagggg
aagcaagtctactgtccttcacagctgacacctgaggatctcgcacgggtccctgagaat
tcaaccagtaacatcttgaacagattactgatcacatatgatcctcgaatcaggcccaac
ttcaaaggcattcctgtggaggacaaagtgaacatatttataaacagctttgggtcaatc
caggagaccactatggattacagagtgaacatctttctgaggcagcgatggaatgatccc
agactcaggctacctcgggactttaagtctgactcactcaccgttgatcccaagatgttc
aaatgcctgtggaagcctgatttgttcttcgctaacgagaagagtgccaacttccatgac
gtcacccaggagaacattctcctcttcatcttccgcaacggtgacgtcctcatcagcatg
aggttgtctgttactctatcctgtcctttggacctgaccctgttccccatggatacgcag
cgctgtaagatgcagctggagagctttggctatacgacggatgacctgcagtttatgtgg
cagtcaggagaccctgtccagatggaggagatcgccctgccccagtttgatatcaaacag
gaggacatagagtatggaaactgcaccaaattctatgcagggacaggctactacacgtgt
gtggaggtgatattcaccctgaggaggcaggtgggcttctacatgatgggtgtctatgcc
cccacactgctcattgtggtcctctcctggctctccttctggatcaaccctgatgccagc
gctgccagggtccctctggggatcctctcggtgctctccctgtcttctgagtgcacgtcc
ctggcgtcagagctgcccaaggtttcctacgtgaaggccatcgacatctggctgatcgcc
tgcctactgtttggcttcgcctccctggtggagtacgccgtggtgcaggtgatgctcaac
agccccaagcgcatcgaggccgagaaggccaagatggcatccaaggtgaaggcagagggt
aaggagaaggcggcaggcaagaacaacacggtcaatggtaccagcgagacgccctgtcat
gtcagcacactgcagggggcagagacccggtgcaaaaaggtgtgcacctccaaatcggac
ctgcgcaccaacgacttcagcattgttggctcactgccgcgggactttgagctctcgaac
tttgactgctacgggaagcccattaccttgccccacggcctgagcaaaagccaggccaag
gccaagaaaccgccgccgcccaagcccatcatcccctcagctgccaagcgggtcgacctc
tatgcccgagccctcttccccttctccttcctcttcttcaacgtcatctattggtccgtg
tacttgtga
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