Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366366
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Entry
139366366 CDS
T10872
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139366366
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139366366
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139366366
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139366366
NCBI-ProteinID:
XP_070959859
LinkDB
All DBs
Position
14:17716066..17865839
Genome browser
AA seq
1682 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIVRGYHTECSKA
QLPADFSRLHLADGLHPQVTHVSSSHSGCSVTSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEARPEILCMGNSF
GVSPTIEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTKERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGNKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREVRVSKMYGHLRLLNI
ACAAKAKLRLVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILE
VNGQNFENVQLTKANEILRNNTHLSISVKTNLLVFKELLARPEHDHEAEGEEPPEVDRKN
GAPAHLPKIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLT
SILPPKPYNDVGVGQSQDDSIVGLKQSKQIPAALPVSGSLSSSNPDLLQSHHRILDFNNQ
PAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAVPEAYSLCEVSI
TPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLS
TMEVATQLSMRAFELFCAIEPTEYIDDLFKLKSKTGSFCLKRFEEIINQETFWVASEVTR
EPNQLKRMKTVKHFIKIALHCRECKNFNSMFSIISGLNLAPVSRLRGTWEKLPSKYEKLF
GDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKL
RMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVR
RSSFLNAKKLYEDAQMARRVKQFLSNLSLETNEEALQTLSLQCEPSINTLPKNAGGSKRP
DTSPVVSRAASQQRGQLQKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSL
SEEASKRQTEDTVTSNNTSQLSSPPTSPQSSPKKGLGTLKGQSVRRVTFTSKQTATGYPR
TGDAYSDSGHSEISSRSSLVSNSSFDMAQEERRGLRHSGGVGDPHAGGVRLERRATTDPD
QYSLGSYSSMQDCRGLYTCATVLSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDN
IQTMQQGRSWETLAFGPGGVVSVGVHPPGGPEAFIGVPSGLWASQARGSWASASSSSSSA
AYWGEDSEGDTGTIKRRGGKDVNADPETSSITSMGSDEAKQHGRPSPITAGNKGLIIRKE
SRYREPPPTPPGYTALTISDFSEGQTQSPPPPTAPSHSGRRPPDYSTALQRSRMVTQSPD
SQHHHQAQQHPGSGTTKRHGLHRTRSPDEDEEPEEEEGESLSPKLVALRKTVAHTTPETT
RP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagttttcgtcaagctgtgatgatgaatccggcggaaaga
acgcaacaggacctggagatagtctactcctatctgcatggaatggaggccctgtctaac
ctcagagaacaccagctgaggataatgtgtgagacagtgcgctatgaaagacacgaagcc
aatgaagtgctctattacccggatgacatcggaagctgctggtatatcctactgtccggg
tctgtcttcatcaaggagtccatgttcctgccaagaagcagttttgggaagcgttctgca
gggagcctgagacgtggatgtgagtgcatcgttctggaaccttcggagatgattgtggtg
gactatatggaggaaaatgaggagtacttccagaggcaagcatcacatcgtcagtcccgc
cgcaggttccgcaagatcaaccagaaaggcgagcggcagaccatcattgacacagtggac
ccgtaccccaccggcaagccacccatagtcaggggatatcacacggaatgcagtaaagct
cagctccccgcagacttcagccgactccacctggccgacggcttgcacccacaggtgacc
cacgtgtcttccagccactcaggatgtagtgtcaccagcgactctggaagcagcagcctg
tcagacatatatcaggccacggaaaacgagccaggcgacatggacctcagcggcctgccc
gagaccgccgtcgactcagaggacgacgatgacgaggaggacattgagcgagcgtcggac
cccctcatgagccgcgacattgtgcgggactgcctggagaaggacccaatggaccgcacc
gatgacgacatagagcaattactggagttcatgcatcagctgccagcgtttgccaacatg
accatgtctgtgaggagggagctgtgtgccgtcatggtgtttgccgtggtcgagcgggcc
ggcaccatcgtactcaatgacggggaagagctggactcgtggtcagtgatcctgaatggc
tcggtggaggtgacgtaccctgaggccaggcctgagatcctgtgtatgggcaacagcttc
ggggtctcccctaccatagagaaggagtacatgaagggagtgatgaagactaaggtggac
gactgtcagtttgtgtgcatagcgcagcaggattactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtggaggaggagggcgagatagtcatggtcaaggagcaccgtgag
ctggaccgcaccggcaccaggaagggacacatcgtcatcaagggcacgaaggagcgtctg
actatgcacctggtagaggagcactctgtggtggaccccacctacatcgaggacttcctg
ttgacctacaggactttcctctccagccccatggtcgtgggcaacaagctgctcgagtgg
ttccacgacccaagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaat
cacttcaatgactttgaaggcgaccctgcaatgactcactttcttgaagagtttgagaac
aatctggagagagaggtccgtgtctcaaaaatgtacggccaccttagactgttaaacatt
gcctgcgctgctaaagccaaactgcgactagtgacactgaccaagccatccagggaggcc
ccactagccttcaccctgctggggggctccgagaagggcttccgcatcttcatcgacagc
gtggagcctggaagcaaggccgcggaagccggccttaaacgaggagaccagattctggag
gtgaatgggcagaactttgagaatgtccagctcacgaaagccaatgagatcctgaggaac
aacacccacttgtcaatttctgtgaaaacgaatcttttagtattcaaggagctccttgcc
cgaccagagcacgaccacgaggcagagggtgaggagccgccagaggtggaccgcaagaat
ggcgccccggcacacctgcccaagatcggggatatcaagaagggctcgcgctactccatt
cctgacctggcggtggatgttgagcaggtgatgggcctggagaaggccagcaagaaggcc
aaagccaacacggtggggggaaggaacaagctcaagaagatctttgacaagacgctcacc
agcatcctgcccccaaaaccatacaacgacgtgggtgtgggccagtcgcaggacgacagc
atcgtgggcctgaagcagtccaaacagattccggccgcgctgccagtcagcggcagcctg
tcgtccagcaaccctgacctgctgcagtcccaccaccgcatcctggacttcaacaaccag
cctgccccagtcgtgacgaacatgtcagaccaggtgctgcgggtgttcaaggcagaccag
caaagtcgatacatcatgatcggtaaggacaccacggccaaagaggtggtggcccaggcc
atccgggagtttgccctgactgctgtgcccgaagcctattccctgtgtgaggtgtccatc
acgccggaaggcgtcattaagcagcgccggctcccggagcagctgtccaagctggcagac
aggatacagctcagtggcagatactacctgaagagcaacatggagacagagaccctctgt
tcggacgaggacgcccaggacctccttcgtgaaggccagatctccctcctccagctgtcc
accatggaagtagccacgcagctgtccatgcgcgccttcgaactcttctgcgccatcgag
cccaccgagtacatcgacgacctgttcaagctcaagtccaagacgggctcgttttgcctc
aagcgcttcgaggagatcatcaaccaggagaccttctgggtggcgtcagaggtgacccgg
gagcccaaccagctcaagcgcatgaagacggtcaagcatttcatcaagatagctctccat
tgtagagagtgcaagaacttcaactccatgttctccatcattagtggtctgaacctggcc
ccagtatctagactccggggcacgtgggagaagctgcccagtaagtacgagaagctgttc
ggggacctgcaagacctgtttgatccatccaggaacatggccaagtatcgcaatgtgctc
aacaaccagaacctccagcctcccatcatccccctgttccctgtcatcaagaaggacctc
accttcctgcatgaagggaacgactctaaagtggacggcctggtgaactttgagaagctg
cggatgatcgccaaagagatccgccacgtgggtcgcatggcctccgtcaacatggaccca
gcgctcatgttcagaaccaggaagaagaaatggaggagtttaggttctcttagccagggc
agtgccaacgcggcggtgctagacgtcacccagacgggcgggcacaagaagcgggtgagg
cgcagctccttcctgaacgccaagaagctgtacgaggatgcccagatggcccgcagggtc
aagcagttcctgtccaacctcagcctggagaccaacgaggaggcgctgcagaccctctcg
ctgcagtgtgagccctcaatcaacacactgcccaagaatgctggtggcagtaagaggcca
gacacgtctccggtggtgtccagggctgccagccagcagaggggccagctgcagaagggc
aaccaggccctccaggtgcctgctgtggctctctacccctcacgcaagaaagtacccgtc
aaggacctgcctccattcggcacgagttcccctcagtcgttgaagaagatcctgtcactg
tcagaggaggccagcaagcgtcagactgaggacactgtaacatccaacaacacctcgcag
ctctcctccccgcccacctcaccacagagctcgcccaagaaggggctcgggacactgaag
ggccaaagtgtccggagggttacctttaccagtaaacagacagccacaggctaccccaga
acaggagatgcctactcagactcgggtcacagcgagatctcatcgcgctccagcctggtc
agcaactcctcctttgacatggcccaggaggagaggagggggctcaggcactccggcggg
gtgggagacccccacgctggaggggtgcgtctggagaggagggctacgacagacccggac
cagtacagcctcggttcctactcgtccatgcaggactgccggggtctgtatacctgtgcc
acggtgctatctcccagctctgaagagctgacccaggaccaaggggaccgtgtctccctg
gatgctgcagacagtggccgcggctcctggacctcgtgctcctcgggctcccacgacaac
atccagaccatgcaacagggacgcagctgggagaccctggcctttgggccgggtggtgtg
gtcagtgtgggtgtccatcctcccggggggcctgaagcgtttataggggtcccctctgga
ctgtgggcgtctcaggctagagggagctgggcatcggcctcttcttcatcttcctctgcg
gcgtactggggcgaggactcggagggtgacacgggcacgattaaacgccgaggcgggaaa
gacgtgaacgctgacccggagacgagtagtatcacgtccatggggtctgacgaggctaag
cagcacgggaggccatcgcccatcaccgccggcaacaagggtcttatcatacgaaaggag
agccggtaccgcgagccccctcccaccccgccaggctacaccgcactgacaatctctgac
ttcagtgagggccagacgcagtcgccacccccgcccacggccccatcccactctggccgc
cgcccacccgactactccacggccctgcagcgctcgcgcatggtcacccagtcgcccgac
tcccagcatcaccaccaggcccaacaacacccaggttccggaaccacaaagcgccatggg
ctccaccgcacccgctcgccagacgaggatgaagagccggaggaggaagagggtgagtcc
ttgtctcccaaactagtcgctctgaggaagacagtggcacacacaacaccagagacaacc
aggccctga
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