Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366372
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Entry
139366372 CDS
T10872
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139366372
04090 CD molecules [BR:
ocla04090
]
139366372
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139366372
CD molecules [BR:
ocla04090
]
Proteins
139366372
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
PIN_8
COG5_N
Motif
Other DBs
NCBI-GeneID:
139366372
NCBI-ProteinID:
XP_070959889
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Position
14:18484602..18598523
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AA seq
900 aa
AA seq
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MWKTGLLLLFWGLLTSSELQQEATEPEPRNQPPSGKLDFGYVPQGVYKTLAYYEPGVIGI
LFHMVHAFLCVVQPNPFPEDLVVKVAKDKFGAIQSEYQKPENIVLTLQAIYYETGFMVCA
VLGLLFIVLLPLVGLFFCLCRCCENCGGEMHQRQRKNADCQRGLLTTLLFATSLIITAGV
LCAYAANQNLSSQLEGMKRLVSSNLKDLQTFANETPTQIDYLIAQYATAKYTVISDLDNV
GPLLGGNIHVELGTEVHPALDGVLRMAGAMRETKEALENVSVSLEVLQEATGKLHFNLSL
VRSSLNRTLNDPGCSGEDSDATTTQLCRSIHSSLAQLHVSANFTRLPDVNNQLESVNQVL
KTDLSDIIQKGFSSFNDTPGMVSDQMRDVVEGARGMLDVISTNISSFSKVFPVHSSLANF
TNFIIHTQSKIEDSYPEIDQIDFYRWICCTGLCCMVVLILAFNFLAILCGTMGYDKHASP
TTRGCVSNTGGTLLMAGVGFSFLFSWILMGVVTATFLVGGNVEKLVCEPFHTKELFKVLD
TPHLVNPEWRNFIPGYMYNDSDLDLTVENFYSNCKNNRSLYSAMRLDKVFNVTTLLNSSL
YTKEVAKMFDSVKIDLRGIVLLESEGKQSLIDFSETGIAEINYAAYLAEVNKGVTLVDLL
SYANELEAQTDLMPKGPLQTSLKGHANSLRQIHSQLVIPMEQAMKYVRARSTLNQSIRLL
ERTASDLPNKITDVLKTIEAAQYLISQNATHVAIQETEKYKQTIVGYFRQYIEWVRTSLT
MEVAACKPFSNIVDTVEIVACSFLVDSLNTFWFGLGCCALFLLPSIILSVKLAKFYRRMD
TEDVYDDIETIPMKTMEIGNNGYHNECLQGIQNPVMTSIPAYDTMTRFPRASAPPRHIDW
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaccgggctccttctcctcttttggggactattaacatccagtgaactccag
caagaagcaacggagccggagccccgaaatcaaccaccgtcgggaaagttggattttggc
tatgtgccccagggagtttacaaaaccctcgcctattacgaacctggagtaatagggata
ctgttccacatggtgcacgcttttctatgcgtcgtgcagcccaaccctttccctgaagat
ctcgtcgtcaaagtcgccaaggataaatttggagccattcagtcggagtatcagaagcca
gagaacattgtgctgacgctccaggccatctactatgagacaggcttcatggtgtgtgcc
gtgctcggcctgctcttcattgtcctactgcccctggttggcctcttcttctgcctgtgc
cgctgctgcgaaaactgtggcggcgagatgcaccagcgccagcggaagaacgctgactgc
cagcggggcctgctcaccacactgctcttcgccacctcgctcatcatcacggctggagta
ctgtgtgcgtatgcagctaaccagaacctgagctcccagctggaaggcatgaaaagactg
gttagcagcaacctgaaggacctgcagacctttgccaatgagacgccaacgcaaattgat
tacctaatagcacaatacgccactgccaagtacacagtcatttctgacctagataatgtg
ggtcctctgcttggagggaatattcatgtggaattgggcacagaggtgcatcctgcactg
gacggggtgctccgtatggctggagccatgcgggagaccaaggaggccctggagaacgtg
agtgtgtctctggaggttctccaggaggcgacagggaagctccacttcaacctgagcctg
gtgcgctctagcctgaacagaaccctcaatgatccgggttgcagcggcgaggactcggat
gccaccaccacccagctctgccgctccatccacagctccctggcacagctccacgtcagc
gccaacttcacccggttacctgatgtgaacaatcagctggaaagtgtgaatcaggtgctg
aaaacggacctcagcgatatcattcaaaagggcttctcctcattcaatgacactccaggc
atggtgagtgaccagatgagggacgtagtcgagggagcccggggcatgttggacgtcatc
agcaccaacatcagcagcttctccaaggtgttccctgtacacagctctctggccaacttc
accaacttcatcattcacacacagtccaagatagaagactcttaccctgagatcgatcag
atagacttctacaggtggatttgctgtactggcctctgctgcatggtggttctcatcctg
gccttcaacttcctggccatactgtgtggcaccatgggatatgacaagcacgcctccccc
accacacggggctgtgtctccaacaccggcggcacccttctcatggccggtgtgggtttc
agcttcctcttttcttggatactgatgggagtggtgaccgccaccttcctggtcggaggc
aacgtggagaagctggtctgtgaacccttccacaccaaggagctcttcaaggttttggac
actcctcacctggtgaaccctgagtggaggaacttcatcccagggtatatgtacaacgac
tcagacctggatctaacagtggagaatttctacagtaattgcaaaaataacagaagtctc
tactctgccatgcgcctggataaagtcttcaatgtcacaaccttgctaaactccagcctg
tacaccaaggaagtggcgaagatgtttgacagtgtgaagattgacctgagaggtatcgtc
ctgctggagtctgaggggaaacagagcctcattgacttctctgagactggcattgcggag
atcaactatgcagcatatctggcggaggtcaacaaaggggtgactctggtggacttactg
tcgtacgccaatgagcttgaggcacagacggaccttatgcccaaagggcccctccagacc
tctctgaagggccacgccaacagtctccgtcagatccacagtcagctggtcatccctatg
gagcaggccatgaaatatgttagagcgaggagtacgctgaatcagagcatcagactactc
gaaaggactgcctcagatctgccgaacaaaatcactgatgtgctgaagaccatcgaagcg
gcccagtatctcatctcccagaatgcaacacatgtcgccatccaggaaacagaaaagtac
aagcaaaccattgttggttacttcaggcaatacatagagtgggtcaggacctccctgacc
atggaggtagcagcctgcaaacccttcagcaacattgtggacacagtggagatcgtagcc
tgcagcttcttggtcgactcgttgaacacattctggtttggcctaggctgctgtgccctg
ttcctccttcctagcatcatcctgtcagtaaaactggcaaagttttaccgtagaatggac
acagaggatgtttacgatgacattgagacaattcccatgaaaactatggaaattggtaat
aatggttatcataatgagtgtttacaaggtatccaaaaccctgtaatgacaagcatccct
gcctatgacactatgactaggttcccaagggcctcagctccccctaggcatatcgactgg
tga
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