Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366428
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Entry
139366428 CDS
T10872
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139366428
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139366428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
139366428
NCBI-ProteinID:
XP_070960005
LinkDB
All DBs
Position
14:complement(23747688..23768273)
Genome browser
AA seq
1789 aa
AA seq
DB search
MAGLPPGDPQLVSMIVNHLKTQGLFDQFRRDCLADVDTKPAYLNLRQRVDNFVSNHLSNH
TWSPHLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKIHHTFRPQVERVVREFMSPG
SYVDEPPVPPAPVEEKQDFDLPVQAPSSAPATSMARDAMSILDTITTLNQEASSRASSSG
EKGPKGGSERDQDPEESMQESEGGEQDMSLVEEGEEDQDRKTPEKEEEAKLVSEAQTMEV
KTEDVQEQVDSEREGMKGEGEEVGTQEEAEERNEGKTIGKLKDEVLNKDVDPLQSPNEKH
HINQKARERLKEEYSLEDSDLDGLSDITVSSVHTSDLSSFEEDSDDEQPPSDSTEDGEVS
SEDEKSEKKKTNREEDNEESPERKPRRQAYVHKPFLYSRYYSDSDDEVTVEQRRRSAAKD
KEERLFKRQQNRERMEEKRRQKSAQLEDQESRQQTSSPSLEAQDPRAKEALKEKKVLEKK
MALSRKRKWDSRKEGDVTGKRKGDAAGEFNRKEEAKGISSKSLQHKSIRKVSESAASEER
HRRKSVSTSEESGEPRKLADKSRTHSFILDLEQGSESPLKQRAAGKFDRLSRKELNPKER
KEKECSLSDERSKLKQKLEKRVVSESHTDEPEQNEGAHIEVSSDDKGERKSKVKGDKKVS
VNAREGRASVSEGGVSDEGASKEATTKKGKAPSVEAAKVEKDREKEKNRENEKERERTKA
EKIPLKTDPRQLLRPDSTGSSEERSDMEPGSESIKKKDKHPKEVLKRSKSHTEDKYVEKP
KSKPDIEKEKPRTEHVTQENQKPSKSSSETDKDSRKSRETEPGMKVKVMEKSRSKSREDK
KAQGLEVKNKGSTSGSRPDASKERKREGSMKEQRKDTQENPPEKMEGRSGKKMLDKKAQN
PEKKETQDERKGRKADEKSDKSSISSPAITEPPLKKGPQSKDASTDWDPTDATITTSASV
TYDALSDVTPELEEDDSEMPLGEVEPRPLTTGADALLTLMDICTSADARLGQGSDITGAM
QREACPELSFQEADIKMKEAALTLLSMDPESILSPTLVTPATQEVTEATIPALQRKETAK
RVAKDQEDSEHVLEMDESDLTATASSEKMDEQSRSQVDVLATDILDTGGKDTVVSTWTLV
EGMSQENKSTVDRDEEKPGHADVVPEQEPVLGPSVDKQYETQTEKTKLLAMEHECQVKMD
IDNINKDQTEAQEENGVTESGKCDTPEKPRETRRGRPSKLVKQASNASKSDGQEDEKGSD
LSEMEDKMEGRVTRKGRLSGQKVTTAKDSAMEKNEKDSQEQQSKLDVEVSKDNAGDRATD
SRTPRRGRSSKTFADEEELKEPEKVEETPPRRGRRSGAQAKDSTTGNQEKEEEEKTGETS
SEKPKEKQEIHPPLQKDEEEEEKKKSEQKRGSRRGRPAKPPISKQKTNEDAESSPSKEPT
DTRKPAVKRKRSEESGEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEG
TQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPE
EEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQPEEEGTQESDLKE
QEEKQHGEDRVSQSDDPEKGTEEGSSDNKTDEGEEDKDTPQKKPARRGRPSKGATLTSEE
PENTVSEKTDKKPDKKESEQKEDEEEEETPKSRTATRAAVRLEAERNKPRKPSTRARGEE
ENPANTRGMRGQASASAKAGGRKREASPTAVRTRGGQKSEEPPSKKTKR
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttaccccccggagacccgcagttggtctctatgatcgtcaatcatttgaaa
acgcaaggtcttttcgatcagtttagaagggactgcttggcagacgtggatacaaagcct
gcatacctgaatttaagacaacgagtggacaactttgtgtccaatcacctctctaaccac
acatggagtcctcacttgaacaagaatcagttgagaaacaacatccgacagttggtgctg
cagtctgggatgctggagcagggagttgacaggatagttgctcaggtggtggatcccaaa
atccatcacaccttcaggccccaggtggagagggtggtccgtgaattcatgtcccctggc
agctatgttgatgaacccccagtcccgcctgctcctgtagaggagaaacaagactttgac
ctgccagtgcaagctccttcatctgcccctgctacttcaatggccagagatgccatgtcc
atcctggataccatcaccactctgaaccaggaggccagctcccgggccagctccagtgga
gagaagggcccgaaggggggctctgagagggaccaagacccagaggagtcgatgcaggag
tctgaaggaggagagcaggacatgagtctggtggaggagggagaagaggaccaggacagg
aagacaccagagaaagaagaggaagcgaagcttgtgtcagaggcccagactatggaggtc
aaaacagaggacgtacaggagcaggtggactctgagagagaggggatgaagggtgagggg
gaagaggttgggactcaagaggaggcagaagagagaaatgaggggaagaccataggaaag
ctaaaagatgaggtactgaacaaggatgttgatccacttcagtcccccaatgagaaacac
catatcaatcagaaggccagagagaggttaaaagaagaatattctctggaagactccgac
cttgatggcctcagtgacatcactgtgagctctgtccacaccagcgacctgtcgtccttt
gaggaggacagcgatgatgagcagccaccgtcagattctacagaggacggcgaggtctca
tctgaggatgaaaagtctgagaaaaagaagaccaatagagaggaagacaatgaggagagc
ccagagcgcaagcctcgtcgacaggcctacgtccacaagcccttcctctattctcgttac
tatagcgactctgacgatgaggttactgtggagcagcgtcggcggtcagcggccaaggac
aaggaagagaggcttttcaagagacagcagaacagggaacgcatggaggagaagcgtaga
cagaagtcagctcaactagaagaccaggagagcaggcagcagacctcttcccccagcctg
gaagctcaggatccgagggccaaagaggctctcaaggaaaagaaggttcttgagaagaag
atggccctcagtaggaagaggaaatgggactcgcggaaagaaggagatgttacaggcaag
agaaagggagatgcagcaggagagttcaacagaaaggaagaagcaaagggtatttcctca
aagagcttgcagcacaagtcaatcagaaaagtctctgagtctgcagcatcagaagagagg
cacaggaggaagagtgtcagcacttctgaggaatctggagaacctagaaagctggcagac
aaaagccgtacacattcctttatcctggacttggagcagggatctgagtcaccactcaaa
cagcgagctgctggaaagtttgaccggctttcccgcaaagagttaaaccctaaagagcgc
aaggagaaagagtgtagcctgtcggacgagcgctccaagcttaagcaaaagttggagaag
agagtagtaagtgaatcccacacagatgaacctgagcagaatgaaggggcccacattgaa
gtatcctctgatgacaaaggggagagaaagtccaaggtgaaaggtgacaagaaagtgtca
gtgaatgccagggaaggtagggcatctgtgtcagaaggaggtgtctctgacgagggggct
agcaaggaagccacaaccaagaaggggaaggctccatcagttgaagctgccaaagttgag
aaggacagagagaaggaaaagaacagggaaaatgagaaggaaagggagagaaccaaagca
gagaagattccattaaaaactgaccctaggcagttactccgtccggattccaccggctct
tctgaggaaaggtctgatatggagcctggatcagaaagcatcaagaaaaaggacaaacac
cctaaagaagtcctcaagaggtcaaagagccacacagaggacaaatatgtagaaaaaccc
aagtctaagccagacattgagaaggagaaacccagaacagaacatgttactcaggaaaac
cagaaaccaagtaagtctagctctgaaactgacaaagactccagaaagtccagggagaca
gagcctggaatgaaggtaaaggtcatggaaaagtccagatccaagtcaagggaggataag
aaagctcaaggtttggaggtcaaaaacaaaggtagcacatcaggcagtagacctgacgca
tcaaaggaaagaaaaagagagggaagcatgaaggagcaaaggaaagacacccaggaaaac
ccaccagagaaaatggaaggcaggagtgggaagaaaatgcttgataaaaaggcccaaaac
ccagagaagaaagagacccaggatgagagaaagggacgtaaagcagatgaaaagtcggat
aagtcctcaatctcctcacctgctattacggaacctcctctgaagaaaggccctcaatcc
aaagacgcaagcacagactgggatcccaccgatgccaccattaccacctctgcctctgtt
acctatgatgctttgagtgacgtcacccctgaactggaggaggatgacagtgaaatgcca
ctcggtgaggtggaaccacgtcctttgacaactggggcagatgctcttctgactttgatg
gacatctgtacctcagcagatgcaagactaggccaaggaagtgacatcacaggggccatg
cagcgagaggcctgcccagagctctccttccaagaagcagacataaaaatgaaagaggca
gctctgaccctgctctccatggaccctgagagtatactatctcctaccttagtcactcca
gctacacaggaagtcacagaggcaaccatacctgctctgcagcgaaaggaaactgctaaa
cgtgttgcaaaagatcaggaagattctgagcatgttctagaaatggacgaaagtgatcta
acagctactgcctcatcagagaaaatggatgaacagtcaaggagccaagtcgatgttctg
gccacagatattctcgacacaggggggaaagatacggtggtgtcaacatggacattagtt
gaagggatgtctcaggaaaataaatctactgttgacagagatgaggaaaaaccaggccat
gctgatgttgttcctgagcaagagcccgtattgggaccatcagtcgacaaacaatatgag
actcagactgagaagacaaaactgctggccatggaacatgagtgtcaggttaagatggac
attgataacattaataaagaccagactgaagcacaagaggaaaatggagtcactgagtct
gggaagtgtgacacacctgaaaaaccaagggagactcgacgtggtcggccatcaaagctg
gtcaaacaagccagcaatgcatccaagtcagacggacaagaggacgagaaaggatccgac
ctgtctgaaatggaggacaaaatggagggaagagtaacccgcaaaggaaggctatctggt
cagaaagttaccacggccaaagactccgctatggagaaaaatgagaaggacagtcaagag
cagcagtccaagctggatgtggaagtgagtaaagacaatgcgggtgatagggccacagat
tccagaacgccacgcagaggacgctcgtctaaaacctttgcggatgaggaggaacttaaa
gagcctgagaaagtggaggagaccccgcctcgcagaggcagacggtcaggtgcccaggcc
aaagactccaccacaggaaaccaggagaaagaggaggaagagaaaacaggagagacatca
tcggaaaagccaaaggagaaacaggagattcatccccctcttcaaaaagatgaggaggag
gaggagaagaagaagagtgagcagaagagaggcagtagacggggaagaccagctaaacct
ccaatctccaagcaaaagacaaatgaagatgcagaaagctctccttccaaggagcccact
gatactcgcaaacctgcagtgaagaggaagaggtctgaggaatctggggaggggacccag
cctgaggaggaggggacccagcctgaggaggaggggacccagcctgaggaggaggggacc
cagcctgaggaggaggggacccagcctgaggaggaggggacccagcctgaggaggagggg
acccagcctgaggaggaggggacccagcctgaggaggaggggacccagcctgaggaggag
gggacccagcctgaggaggaggggacccagcctgaggaggaggggacccagcctgaggag
gaggggacccagcctgaggaggaggggactcagcctgaggaggaggggactcagcctgag
gaggaggggactcagcctgaggaggaggggactcagcctgaggaggaggggactcagcct
gaggaggaggggacccagcctgaggaggaggggacccagcctgaggaggaggggacccag
cctgaggaggaggggacccagcctgaggaggaggggacccaggaaagtgacctgaaggaa
caagaggagaaacaacatggagaggatagagtgagccagtctgacgacccggagaagggg
acagaagagggctccagtgataacaaaacagatgagggtgaggaggacaaagacacgcct
cagaagaaacctgctcgtaggggaaggccctcgaagggagcaacattgacgtcagaggaa
ccggaaaataccgtatctgagaagaccgacaaaaagccagacaagaaagagagcgaacaa
aaagaggatgaagaggaggaagagacgcccaaatccagaactgcaactcgagctgctgtt
cgccttgaagctgagaggaacaaaccaaggaaaccttccacccgagctcgaggtgaagag
gagaaccctgcaaacacacgtgggatgagaggacaggcctcggcgtcagctaaggcaggg
gggcgtaaacgtgaagccagccccacagcagtgcgcaccagaggtggacaaaaatctgag
gagcccccttccaaaaagaccaagcgatga
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integrated database retrieval system
